Variovorax paradoxus B4: VAPA_1c48700
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Entry
VAPA_1c48700 CDS
T02835
Name
(GenBank) transcriptional regulator, IclR family
Organism
vpd
Variovorax paradoxus B4
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Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_20
RPA_C
HTH_27
Motif
Other DBs
NCBI-ProteinID:
AGU51935
UniProt:
T1XIH4
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Position
1:complement(5133715..5134452)
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AA seq
245 aa
AA seq
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MVVKTAFRVIEIVELFAREKQPLALSEMARLLEMPVSSCLGLIRTLEEQGYMYETGRRQG
YYPTGRLLAMAQIIAAHDPVLDRVRPALEELRDGARETVLFGKFRDPNTVVYLEVLSAPQ
SIRYSAESGETRPAYANSMGRALLSTLAPEARRKLLAATPLAPLTDATLTTPDAIEQELE
RSPARGWYGNLGESIPDLVGLAWPLRIGSEAYAISVAGPRYRLEPRIDEVAAMLRSACLA
IEHKG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaaaacagcgtttcgcgtgatcgagatcgtcgagctctttgcccgggagaag
cagccgctggcgctgtcagagatggcgcgcctgctcgagatgccggtgtccagctgcctc
gggctgatccgcacgctcgaggagcagggctacatgtacgagaccggccgccgccagggc
tactaccccaccggccggctgctggcgatggcgcagatcatcgcggcgcacgacccggtg
ctcgaccgcgtgcggcccgcgctcgaagagctgcgcgacggggcgcgggaaaccgtgctg
ttcggcaagttccgcgacccgaacactgtcgtctacctggaagtgctgagtgcgccgcag
agcattcgctattccgccgagtcgggcgagacgcgtccggcctatgccaattcgatgggc
cgcgcgctgctctccacgctcgcgcccgaggcgcgccgcaagctgctggcagccactccg
ctggcaccgctgaccgacgccacgctgaccacgcccgacgccatcgagcaggagctcgaa
cgctcgcccgcgcgcggctggtacggcaacctgggcgagagcattcccgatctcgtgggc
ctggcgtggccgttgcgcatcgggagcgaggcctacgccatttcggtggcgggcccgcgc
taccggctggagccgcgcatcgacgaggtggcggccatgctgcgctccgcctgcctggcc
atcgaacacaaaggttga
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