Variovorax paradoxus EPS: Varpa_0233
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Entry
Varpa_0233 CDS
T01392
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00470
D-Amino acid metabolism
vpe01100
Metabolic pathways
vpe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Varpa_0233
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Varpa_0233
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Varpa_0233
Enzymes [BR:
vpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Varpa_0233
Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Precursor biosynthesis
Racemase
Varpa_0233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ADU34455
UniProt:
E6V191
LinkDB
All DBs
Position
250169..251269
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AA seq
366 aa
AA seq
DB search
MPRPILATVHTAALRNNLERVRRSALDARVWAVVKANAYGHGIERVYEGLRGADGFALLD
LAEAERVRALGWRGPVLLLEGVFDARDLELCSRLDLWHTVHCDEQIDMLAAHKTLKPQRV
FLKMNSGMNRLGFTPERFGSAWTRLNALTQVDEISLMTHFSDADGARGIAHQLEAFERAT
RDLPGERSIANSAATLRHADQTRGDWVRPGIVLYGSAPDFPLHDAAHWQLQPTMTLSTQL
LSVQTLKAGDTIGYGSNFTAEGPLTIGVAAVGYADGYPRHCNTGTPVLVNGVRTRMVGRV
SMDMITVDLTPVPDAKFGAEVTLWGRSASTGAVLPIDEVAQAAGTVGYELMCAVAQRVPF
AAPTDE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccattcttgccaccgtccacaccgccgcccttcgcaacaacctggagcgg
gtccgccgttcggcgctcgacgcccgtgtctgggccgtggtcaaggccaatgcctatggc
cacggcatcgagcgggtctatgaaggcctgcgcggcgccgacggcttcgcgctgctcgac
ctggccgaggccgagcgcgtgcgcgccctgggctggcgcggccccgtgctgctgctggaa
ggcgtgttcgatgcgcgcgacctggagctgtgctcgcgcctggacctctggcacaccgtg
cattgcgacgagcagatcgacatgctcgcagcgcacaagaccctcaagccgcagcgtgtt
ttcctgaagatgaactcgggcatgaaccgcctgggcttcacgcccgagcgcttcggctcg
gcctggacgcgcctgaacgcgctcacgcaggtcgacgagatctcgctgatgacgcacttc
agcgacgccgacggcgcccgcggcatcgcgcaccagctcgaagccttcgagcgcgccacg
cgcgacctgccgggcgagcgctccattgccaacagcgccgccaccctgcgtcacgccgac
cagacgcgcggcgactgggtgcgccccggcatcgtgctgtacggcagcgcccccgacttt
ccgttgcacgacgcggcgcactggcaactgcagcccacgatgacgctgtcgacgcaactg
ctctcggtgcagacgctcaaggccggcgacaccatcggctatggctccaacttcacggcc
gaggggccgctcaccatcggcgtggccgcggttggctacgccgatggctatccgcgccac
tgcaacaccggcacgccggtgctggtgaacggcgtgcgcacccgcatggtgggccgcgtg
agcatggacatgatcaccgtcgacctcacgccggtgcccgatgcgaagttcggcgccgaa
gtcacgctgtggggccgctccgcttcgacgggcgcggtgctccccatcgacgaagtcgcg
caggccgcgggcaccgtcggctacgaactcatgtgcgccgtggcccagcgcgtgccgttc
gccgctcccaccgacgaatga
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