Variovorax paradoxus EPS: Varpa_0501
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Entry
Varpa_0501 CDS
T01392
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpe02044
]
Varpa_0501
02035 Bacterial motility proteins [BR:
vpe02035
]
Varpa_0501
Secretion system [BR:
vpe02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Varpa_0501
Bacterial motility proteins [BR:
vpe02035
]
Pilus system
Pilus assembly proteins
Varpa_0501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Clink
Motif
Other DBs
NCBI-ProteinID:
ADU34723
UniProt:
E6V4H7
LinkDB
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Position
539770..541368
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AA seq
532 aa
AA seq
DB search
MNLKRCTLAATALCLVFQAEAQGPYPGAPAASPVPLGTVAPAPAFSAPGAPAGARAETSP
GIRPPAPPPSQASITEAELQRIAARATVLQRLPDLLTLYVGQMALVKMPGVSRVAIGNGK
VMEARVLDGANMLITAQDAGDSTLHVWDKNGTVRKLKVRVNVADLERIADELREITRGIS
GVNIRRIGERIIMDGNSLDPAAVERLNTVAQLYAPAVVSLATADRIRVDRMVDIQVRIVE
FSKTALDDLGVRWQSSGDGFNFGLFSDIASSGSYRILPDGSAFNTSTPQGTALLGQNRRM
PEAYFGIGLSLTSRINLLVQRGNAFLLASPNLSTRSGGEAKFLAGGEIPLPALSTQGAGS
VEFKPYGVRLNIKPIADGEGNVSGSILTEVSSIDRSVAVQGIPGLLIRRTDTEFNVKAGE
TIVLSGLLSRESTRSSDGVPGLRKTPIIGRAFRADNDTDKEQEVVVFITPRVVGPADSRP
RIERARELERDVGSNFGTLTEDKSDPNGSRPPAAAADIGGIPAGTPGQPVAP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaagcgatgcaccttggcagcgacggcgctgtgtcttgttttccaggccgag
gcgcagggtccgtaccccggcgcaccggcggcatcgcccgtgccgctgggcacggtggcg
cctgcgccggctttctcggcaccgggcgcgccggcaggggcccgcgctgaaacttcgccg
ggcatccgcccacccgcgccaccgccctcgcaggcctccatcaccgaggccgagctgcag
cgcatcgccgcgcgcgccaccgtgctgcagcggctgcccgatctgctcacgctctacgtc
ggccagatggcgctggtcaagatgccgggcgtctcgcgcgtggccatcggcaacggcaag
gtgatggaagcccgcgtgctcgacggcgcgaacatgctcatcaccgcgcaggacgcgggc
gacagcacgctgcatgtctgggacaagaacggcaccgtgcgcaagctcaaggtgcgggtg
aacgtggccgacctggaacgcatcgccgacgagctgcgcgagatcacgcgcggcatctcg
ggcgtgaacatccgccgcatcggcgagcgcatcatcatggacggcaacagcctcgatccg
gccgccgtcgagcgcctcaatacggtggcgcagctctacgcgcccgcggtggtgtcgctg
gccacggccgaccgcatccgcgtggaccgcatggtggacatccaggtgcgcatcgtcgag
ttcagcaagaccgcgctggacgacctgggcgtgcgctggcagagctcgggcgacggcttc
aatttcggcctgttttccgacatcgcctccagcggcagctaccgcatcctgcccgacggt
tcggccttcaacacttccacgccgcagggcacggcgctgctgggccagaaccggcgcatg
ccggaggcgtacttcggcatcggcctcagcctcacctcgcgcatcaacctcttggtgcag
cgcggcaacgccttcctgcttgcctcgccgaacctttccacccgcagcggcggcgaggcc
aagttcctggccggcggcgaaatcccgctgcccgcgctcagcacgcagggcgcgggttcg
gtcgagttcaagccttatggcgtgcggctgaacatcaagcccatcgccgacggcgagggc
aacgtgtcgggcagcatccttacggaggtgagcagcatcgaccgcagcgtggcggtgcag
ggcattccgggcctgttgatccgccgcaccgacaccgagttcaacgtgaaggccggcgag
accatcgtgctgtcggggctcctgagccgcgaatcgacgcgctccagcgacggcgtgccg
ggcctgcgcaagacgccgatcatcggccgcgccttccgtgccgacaacgacaccgacaag
gaacaggaagtggtggtgttcatcacgccgcgcgtggtcggcccggcggacagccgcccg
cgcatcgagcgcgcgcgcgaactcgagcgggacgtgggaagcaacttcggcacgctgacc
gaagacaagtcggacccgaacggttcgcgcccgcctgctgctgccgcggacatcggcggc
atccccgccggcacgcccggccagcccgtcgctccttaa
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