Variovorax paradoxus EPS: Varpa_0703
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Entry
Varpa_0703 CDS
T01392
Name
(GenBank) Pectic acid lyase
Organism
vpe
Variovorax paradoxus EPS
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase
Glyco_hydro_127
C5-epim_C
Glyco_hydro_88
Motif
Other DBs
NCBI-ProteinID:
ADU34921
UniProt:
E6V7J9
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Position
complement(792920..794761)
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AA seq
613 aa
AA seq
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MKRRQFAISVLTPVALAACGGGGGGNGPVFPFPVPPPPPAPAPAPTPQATAAAALKRAAS
YMDEVVSYRGGYVWSYSPDLTQTFGEMEAKRTMLWLQPPGTSSIGHIYLDAYHATGDERF
YQAADRTAKAVAAAQHSSGGWNYIHDFNGEASLQDWYETVGKNGWRLEEFQHYYGNATFD
DATTAVASQLMLRMYLEKNDPVYRAATDNAIRFITDAQFGSQFGVADGGWPQRFPHNPNA
VASMPLPNPAQLPAGARAGMEDGDYTLHVTFNDDVMGENIKFLTMCVMTLGRTDLVANIT
RAMDCMQRMQWTSPALAQQSGWSLQHLSRTTGGRAAGEPGGARSYEPRSLATHTTQTNIQ
QLLGYFTLTGDKKYLSQLQKAIDWLKSPSIQLPANVATLNPLLAGRNVATFIELDTNEPL
FVHRYGSNIHNGAYFFDKDITNTISHYSSGRSVDPAALQKRLDELNAMTQPQIDAMVAKS
PLKATAPRALPKYFAAVREVDFPDLFEGAVLKTPAVPESEAQTIVAALVNGNYWTAPVPE
IVNPYRGDGPTAPYTGTAYRSRHVGDIYDTSPYPADAPPEIAPYVKRDKPQFITTANFIA
RMGRLISFISPVA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaggcaattcgcaatttcggtcctgactcccgtcgcattggcggcatgtggc
ggaggcggaggtggaaacggccccgtctttccattccccgttccgccgccgccacccgcg
cccgccccggcgcccacaccgcaggccacggccgcggcggcactcaagcgcgcagcgagc
tacatggacgaagtcgtctcctaccgtggcggctacgtgtggtcgtactcgcccgatctc
acgcagaccttcggggaaatggaggccaagcgcaccatgctctggctgcagccgccggga
acctcctccatcggccacatctacctggacgcctaccacgcgaccggcgacgagcgcttc
tatcaagcagccgatcgcacggccaaggccgtcgccgctgcccagcacagctcgggcggc
tggaactacatccatgacttcaacggcgaggcgtcgctgcaggactggtacgagacggtg
ggcaagaacggctggcgcctcgaggagttccagcactactacggcaatgcgaccttcgac
gacgccactaccgccgtggcctcgcagctgatgctgcgcatgtacctggagaagaacgat
cccgtctatcgggccgcgaccgacaacgccatccgattcatcaccgacgcgcagttcggc
tcccagttcggcgtggccgacggcggatggccgcagcgctttccgcacaaccccaacgca
gtcgcatccatgccgctgcccaacccggcgcaactgccggcgggcgcacgcgcgggcatg
gaagacggcgactacacgctgcacgtgaccttcaacgacgacgtgatgggcgagaacatc
aagttcctcacgatgtgcgtgatgacgctgggccgcaccgacctcgtggccaacatcacg
cgggcgatggattgcatgcagcggatgcagtggacctcgccggcgctggcgcagcagtcg
ggctggagcctgcagcacctgtcccgcacgacgggcggccgtgccgccggcgaacccggc
ggcgcgcgctcgtacgagccccgctccctggccacgcacaccacgcagaccaacatccag
cagctcctgggctacttcacgctgaccggcgacaagaagtacctgtcgcagttgcagaag
gcgatcgactggctgaagtcgccctcgatccagttgcccgccaacgtcgcgacgctcaat
ccgctgctcgccggacgcaacgtggccaccttcatcgaactcgacacgaacgagccgctc
ttcgtgcaccgctacggctccaacatccacaacggcgcctacttcttcgacaaggacatc
accaacaccatcagccactattcgtcgggccgttcggtggaccccgccgcgctgcaaaag
cgcctcgacgaattgaatgcgatgacgcagccgcagatcgatgcgatggtcgcgaagtcg
ccgctgaaggccactgcgccccgcgcactgccgaagtacttcgccgcggtgcgtgaagtg
gactttcccgacctgttcgagggtgcggtgctgaagacgcccgcagtgcctgaatccgaa
gcgcagacgatcgtggccgcgctggtgaacggcaactactggaccgcgcccgtgcccgag
atcgtgaacccgtaccgcggcgacggccccacggcgccgtataccggcacggcctatcgc
agccgccacgtcggcgacatctacgacacctcgccctacccggccgatgcgccgccggag
atcgcgccgtatgtgaagcgcgacaagccgcagttcatcacgacggcgaatttcatcgcc
cgcatggggcggctgatctcgttcatttcaccggtggcctga
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