Variovorax paradoxus EPS: Varpa_1086
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Entry
Varpa_1086 CDS
T01392
Name
(GenBank) transcriptional regulator, DeoR family
KO
K11534
DeoR family transcriptional regulator, deoxyribose operon repressor
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_1086
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Varpa_1086
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
Sigma70_r4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADU35304
UniProt:
E6UVS1
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Position
1211280..1212062
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AA seq
260 aa
AA seq
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MRKTAGAEARAVRLAKMQELVEAGGPLPIKQAAQRLDVTEMTIRRDLSSADSPLSVLGGY
VLATTLPGAERYSLDEASDQHAANKRLACERAAEWVQPHDSLFIDCGTTMVHFAEALPPD
MPLSVVCYSTNIAAVLSRRPNTQLMLMGGLYHPSSATFFSDEGLQYLDKLGVNKAFISAG
GLDVARGASCSNFHEVPVKQAAIRSASESFLIVDESKLGTLRPAFFSPLQAFARIVVGGA
PAAAVKKQFKELPVEFARAD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagaccgcaggagccgaggcccgggccgtgcgcctggcgaagatgcaggaactc
gtcgaggccggcggcccgctgcccatcaagcaggcggcccagcggctcgacgtgaccgag
atgaccatccgccgcgacctgtcgtcggccgattcgccgctctccgtgttgggcggctac
gtgctggcgaccacgctgccgggcgccgagcgctactcgctcgacgaggccagcgaccag
cacgccgccaacaagcgcctggcctgcgagcgcgcggccgagtgggtgcaaccgcacgac
agcctgttcatcgactgcgggaccacgatggtccacttcgcggaagcgttgccgcccgac
atgccgttgagcgtcgtgtgttactccacgaacattgcagcggtgctcagccgccggccg
aatacgcaactgatgctgatgggcgggctgtatcacccctcatcggccactttcttttcc
gacgaagggctgcagtacctcgacaagttgggcgtgaacaaggccttcatctcggccggc
gggctggacgttgcgcgcggcgcgagctgctccaactttcacgaggtgccggtgaagcag
gcggccatccgcagcgcgtcggagagttttctcatcgtcgacgaaagcaagctgggcacg
ctgaggcctgcgttcttcagcccgctgcaggccttcgcgcggatcgtggtgggcggcgcg
ccggctgcggccgtcaagaagcaattcaaggaactgccggtggagttcgcgcgggctgat
tga
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