Variovorax paradoxus EPS: Varpa_1299
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Entry
Varpa_1299 CDS
T01392
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1299
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_1299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
Mg_chelatase
AAA_29
AAA_7
AAA_16
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADU35515
UniProt:
E6UZ98
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All DBs
Position
1453452..1454498
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AA seq
348 aa
AA seq
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MANANNTPHAPRLTVSNLSTSFPTEDGLIRSVADVSFSIQPGKTTALVGESGSGKSVTSL
TLMRLLPRTANAQVSGSASFVTREGKTLDLLKIGEPEMRSLRGNQLSMIFQEPMTSLNPV
FTIGEQIAESVRLHKGLDRKAALAHALRMLELVEIPAAAQRIHEYPHQLSGGMRQRVMIA
LAMACDPTLLIADEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVV
VLYAGRVVESAPVRPLFAQPEHPYTQGLLACLPGKARVPGQPKPKRLFAIRGQVSSPLAP
PPGCAFEPRCDLALAECSVAMPPLIETHHGREARCIRVQPAQPLVRAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgccaacaacacgccacacgcgccacgcctcacggtcagcaacctgagcacc
agcttccccaccgaggacggcctgatccgttcggtggccgacgtgagcttctccatccag
ccgggcaagacgaccgcgctggtcggcgaatcgggctcgggcaagtcggtcaccagcctc
acgctgatgcgcctgttgcccaggaccgcgaacgcgcaggtcagcggcagcgcctcgttc
gtcacgcgcgaaggcaagacgctcgacctcttgaagatcggcgagcccgagatgcggtcg
ctgcgcggcaaccagctgtcgatgatcttccaggagccgatgaccagcctgaacccggtc
ttcaccatcggcgagcagatcgccgagagcgtgcgcctgcacaaggggctggaccgcaag
gccgcgctcgcgcatgcgctgcgcatgctggagctggtcgagattccggccgcggcacaa
cgcatccacgagtacccgcaccagctctcgggcggcatgcgccagcgcgtgatgatcgcg
ctcgcgatggcctgcgacccgacgctcctgatcgccgacgagcccaccaccgcgctggac
gtgaccatccaggcgcagatcctggagctcatgcggcgcctgcaggccgagaccggcatg
agcatcctcttcatcacgcacaacctgggcgtggtcgcgcaccatgcggacgatgtggtg
gtgctgtatgcgggccgcgtggtcgagagcgcgccggtgcggccgctgttcgcgcagccg
gagcatccgtacacgcagggcctactggcgtgtctcccgggcaaggcgcgcgttccgggg
caaccgaagcccaagcggctctttgcgatccgcgggcaggtatcgagcccgctcgcgccg
ccgcccggctgcgccttcgagccgcgctgcgacctggcgctggccgaatgcagcgtggca
atgccgccgctgatcgagacgcaccatgggcgcgaagcgcgctgcattcgcgtgcagccg
gcccagcctttggtgagggccgcatga
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