Variovorax paradoxus EPS: Varpa_3005
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Entry
Varpa_3005 CDS
T01392
Name
(GenBank) trehalose synthase
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00500
Starch and sucrose metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Varpa_3005
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Varpa_3005
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
Varpa_3005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Mak_N_cap
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ADU37192
UniProt:
E6V6Y8
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All DBs
Position
3236478..3239789
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AA seq
1103 aa
AA seq
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MNAPVSHIALETVEIDNSDDPLWYRDAVIYQLNVKAFFDSNNDGMGDFKGVTAKLDYVKE
LGVNTIWLMPFYPSPLRDDGYDISEYEDVHPQYGTLDDFREMLAEAHKRGLRVITELVIN
HTSSEHPWFKAARLAPPGSPERNFYVWSDTDQIYQGTRIIFTDTETSNWTWDPVAKQYFW
HRFFSHQPDLNFDNPAVMEAILKTMKFWLDMGVDGFRLDAIPYLVERDGTSNENLPETHA
VIKQLRAAIDAQYKNRFLLAEANMWPEDVREYFGDGDECHMAYHFPLMPRMYMAIAQEDR
HPIVEIMAQTPDIPEGCQWAIFLRNHDELTLEMVTSKERDYMYTMYAADMRARINLGIRR
RLAPLMENDLDRVKLMNGMLLSMPGSPIIYYGDEIGMGDNVFVGDRNGVRTPMQWSPDRN
AGFSRADPQRLYLQPIMDPMFGYEALNVETQARDSSSLLNWTKRMLAVRKTSHAFGRGKR
RFLKPGNRKILAYLSEYDGDVILTVFNLSRAAQPVELDLSEFKGFVPIEMLGRAPFPPIG
ELPYLLTLASYGFYWFKLTAEADAPSWHEQGVALQEWPTLVLFDGWTSFFRERVMPWRIG
MSERMRTQFELETLPRHIEIQRWYASKGTAIRRARVVDHAVWEANGQSWLLPLLDLDGPP
GGATYFMPLALAWEERDEERMAGVAQAAIARIRQQAQVGLMGDAFYDEAFCRELVRTIGN
GAEVPTANGKLVFKPTAAFAEMAVDIDALPVGRPSGVSSNTVVTLNETLFLKGYRHVREG
INPELEMGRFLTEVARYPNCVPVLGALEYMTHDGRTMTLAMVQSYMANQGDGWDYTLGYL
ERFLRDAATTDGNAPEATEVADVHGGFLALMATLGRRTAELHRALATRTGAAAFDPEPLA
PADHAGFKAHAAEDATATLALLRERIDLLPGAAQADARTLLDAADALQAGIASRRPVEGV
GVKTRYHGDYHLGQVLVKDNDFVIIDFEGEPARTFDERRTKGSPLRDVAGMLRSFNYARW
SALRRVAQSPEEAERLAAPAIAWEQATRAAFLAGYGDAVDTELLALFELDKALYELRYEL
NNRTDWAQVPLHGVLALIRPARG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacccgtctcccacatcgcgcttgaaaccgtcgagatcgacaacagcgacgat
ccgctgtggtaccgcgacgcggtgatctaccagctcaacgtcaaggccttcttcgactcc
aacaacgacggcatgggcgacttcaagggcgtgaccgccaagctcgactatgtgaaggag
ctgggcgtcaacaccatctggctgatgccgttctacccgtcgccgctgcgggacgacggc
tacgacatctccgagtacgaggacgtgcatccgcagtacggcacgctggacgatttccgc
gagatgctggccgaggcgcacaagcgcggcctgcgcgtcatcaccgagctggtcatcaac
cacacctcgagcgagcacccgtggttcaaggccgcgcgcctcgcgccgcccggttcgccc
gagcgcaacttctatgtgtggagcgacaccgaccagatctaccaaggtacgcggatcatc
ttcaccgacaccgaaacctcgaactggacctgggacccggtcgccaagcagtacttctgg
caccgcttcttcagccaccagccggacctgaacttcgacaacccggcggtgatggaagcc
atcctgaagacgatgaaattctggctcgacatgggcgtggacggcttccgcctggatgcc
attccctacctggtggagcgcgacggcaccagcaacgagaacctgcccgagacgcatgcg
gtcatcaagcaactgcgcgcggccatcgacgcgcagtacaagaaccgcttcctgctggcc
gaggccaacatgtggccggaggacgtgcgggagtacttcggcgacggagacgagtgccac
atggcgtatcacttcccgctgatgccgcgcatgtacatggccatcgcgcaggaagaccgg
cacccgatcgtggaaatcatggcgcagacgcccgacattcccgagggctgccagtgggcg
attttcctgcgcaaccacgacgagctcacgctcgagatggtgaccagcaaggagcgcgac
tacatgtacaccatgtacgcggccgacatgcgcgcgcgcatcaacctgggcatccgccgg
cgcctggcgccgctgatggaaaacgacctggaccgcgtgaagctcatgaacggcatgctg
ctgtcgatgccgggctcgccgatcatctactacggcgacgagatcggcatgggcgacaac
gtgttcgtgggcgaccgcaacggcgtgcgcacgccgatgcagtggagccccgaccgcaat
gccggcttctcgcgcgccgacccgcagcgcctgtacctgcagccgatcatggacccgatg
ttcgggtacgaggcgctcaacgtggagacacaggcgcgcgacagcagttcgctcctgaac
tggaccaagcgcatgctcgcggtgcgcaagaccagccatgccttcggccgcggcaagcgg
cgctttctgaagccgggcaaccgcaagatcctcgcgtacctgagcgagtacgacggcgac
gtgatcctcaccgtgttcaacctctcgcgcgccgcgcagccggtggagctcgacctctcg
gagttcaagggcttcgtgcccatcgagatgctgggccgcgcgccgttcccgcccatcggc
gagctgccgtacctgctcacgctggcctcgtacggcttctactggttcaagctcacggcc
gaggccgatgcgcccagctggcacgagcagggcgtggcgctgcaggagtggcccacgctg
gtgctgttcgacggctggaccagcttcttccgcgagcgcgtgatgccgtggcgcatcggc
atgtcagagcgcatgcgcacccagttcgagctggagacgctgccgcgccacatagagatc
cagcgctggtatgcctccaagggcacggccatccgccgcgcgcgggtggtcgaccacgcc
gtgtgggaagccaacgggcagagctggctgttgccgctgctcgacctggacggcccgccc
ggcggcgccacttacttcatgccgctcgcgctggcgtgggaagagcgcgacgaggagcgc
atggccggcgtggcgcaggccgccatcgcccgcatccgccagcaggcgcaggtcggcctg
atgggcgatgccttctacgacgaggccttctgccgcgagctggtgcgcaccatcggcaac
ggcgccgaagtgcccacggccaacggcaagctggtgttcaagccgacggcggcctttgcg
gagatggcggtcgacatcgacgcgctgccggtcggccgcccgagcggcgtgagcagcaac
acggtggtcacgctgaacgaaacgctgttcctcaagggctaccgccatgtgcgcgagggc
atcaaccccgagctggagatgggccgcttcctcaccgaggtggcgcgctacccgaactgc
gtgccggtgctcggcgcgctggagtacatgacccacgacggccgcaccatgacgctggcg
atggtgcagagctacatggccaaccagggcgacggctgggactacacgctggggtatctc
gaacggttcctgcgcgacgcggccaccaccgacggcaacgcgcccgaggcgacggaggtg
gccgacgtgcacggcggcttcctcgcgctcatggccacgctgggccggcgcacggccgag
ctgcaccgcgcgctcgccacgcgcaccggcgccgcggccttcgaccccgagccgctcgcg
cccgccgaccacgcgggcttcaaggcgcatgcggccgaggacgccaccgccacgctcgcg
ctgctgcgcgaacgcatcgacctgctgccgggtgccgcgcaggccgatgcgcgcacgctg
ctcgacgcggccgatgcgctgcaggccggcatcgcgtcgcgccggccggtggagggcgtg
ggcgtcaagacccgctaccacggcgactaccacctgggccaggtgctggtgaaggacaac
gacttcgtcatcatcgatttcgagggcgaacccgcgcgcaccttcgacgagcgccgcacc
aagggctcgccgctgcgcgacgtggcgggcatgctgcgctcgttcaactacgcgcgctgg
tcggccctgcgccgggtggcgcagagcccggaggaggccgagcgcctcgccgcgccggcc
atcgcctgggaacaggccacgcgcgcggctttcctggccggctacggcgatgcggtggac
accgagctgctcgcgctgttcgagctcgacaaggcgctgtacgagctgcgctacgagctc
aacaaccgcaccgactgggcacaggtcccgctgcacggcgtgctcgcgctcatccggccg
gcccgcggctga
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