Variovorax paradoxus EPS: Varpa_3009
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Entry
Varpa_3009 CDS
T01392
Name
(GenBank) malto-oligosyltrehalose synthase
KO
K00705
4-alpha-glucanotransferase [EC:
2.4.1.25
]
K06044
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:
5.4.99.15
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00500
Starch and sucrose metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
Module
vpe_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vpe_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Varpa_3009
Enzymes [BR:
vpe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
Varpa_3009
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.15 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase
Varpa_3009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
Alpha-amylase
MalQ_N
Motif
Other DBs
NCBI-ProteinID:
ADU37196
UniProt:
E6V6Z2
LinkDB
All DBs
Position
3244724..3249865
Genome browser
AA seq
1713 aa
AA seq
DB search
MVDEANHGPVGGDLGRLCEHFGIATGYFDAFGVRCEVSARSLVALLGEFGVKLDNAGDAG
RALDVARRARWAEALPPVQVVQAGNPAWSVTLRVPASMGRLRWRIGDEHGREVEGEVDAD
TLHENGRSEIDGTLLCERVLHVPLALEAGYHRLRIEGLRGETLLLATPGHCYRPPAVREG
GRVWGTAVQLYSLRSPRNWGIGDFGDLEDLAVRMSAQGADVIGLNPLHALFASTPSNASP
YSPSSRQQLNVLYIDVEAVDGFADCAPARDRVHSPDFQARLAALRAAPLVDYAGVAQAKF
EVLALLFGDFCARHLPAEGAPSEEGRAFLAFVAERGEALRQHALFETLQAHFLETEGGAW
DWHDWPAAWRDADSAEVTAFAVAHAQRVQFHQYLQWLATRQLARVAARCEALGMGVGLYV
DLAVSVDRAGSDTWGAQRVFADGASVGAPPDEFNPAGQGWGLPPLRPDRLREDGYRFFIE
TLRAGMRGAGALRIDHVMGLMRLFWIPQGRSAREGAYVYYPLAEMLAIVAIESHRHRCMV
VGEDLGTVEDAVREALARADVLSYRLLYFEKRHDGGFKPPEAYPAAALVAISTHDLATFA
GWWTAADLRERLALDLFPDPAIFDKQLMDRARERIELTQALQHAGLLSREEAAEAAGLAM
PSPRLVEAAHAFLAATPSALLMVQLEDVAGVVAQANMPGTVDQHPNWRRKLPEPVAVLAN
GDGMRGLGEALRAARPRRIDAGEGESPGLQTRVPRATYRLQFHKDFGFDDAIRVLPYLAK
LGVSHVYCSPIQRARPGSMHGYDVVAHAEVNPELGGEEGFARFVAALKANGLGQLLDMVP
NHMGVFGADNAWWMDVLENGPASLFAQHFDIDWHPLNVELTGKVLLPVLGVHYGEALDNG
ELVLRFEDATGSFAVTYYDHRFPLAPESYPVVLERALSRLGDAAAAARLASLSTAFGHLP
PRDTSDPKAQAERVRDKELLKARLARLAERHPAVAEALVASVAELNLASPEARDALHRLI
ELQAFRLAHWRVAADEINYRRFFDINDLAAVRMERDEVFEATQSFALDLAASGMVDGLRI
DHPDGLYDPADYFRKLQEGYARRAGLVLPTHDAEGRPARPLYVVAEKIAGAHEEVPESWH
VHGTTGYRFANVANGVLVDTAAEAAVLHAWQRFTGETEDFAAMSRAGRREVMRNALSSEL
NVLSTELLRIARADRSTRDYTLNALRRALAEVGACMPVYRTYIVEHPSAQDERFIDEAVN
EAARQSGDADRSIFDFVRSALRGEAVASAPAALGERVRRFAVRFQQFSAPVAAKGVEDTA
FYRYFPLSSLNEVGGEPDQFGIDVATFHALSADRAKRWPHTMLATSTHDNKRSEDVRNRI
DVLSEMPDEWMQALSRWHGLCRGARKKLETGEAPSRADEYLLYQTLLGALPLGGLDAATA
PAFADRIWQYMQKAAREAKLRTRWSHPDADYEAALEGFVRELLADAKEGGCLADIQRLAD
RLAWFGAWNSLTLTLLKYGSPGVPDLYQGSELIELSLVDPDNRRPVDYALRQQQLDGLHA
MADQDGLAARIGDLAAAPHDGRAKLWFIWRLLSLRGRHPLLFREGGYEPLVVEGPMARHV
VAFARQHEGQTLVIVAGRLFVGLSADAAAAPTLPPAAAWNGTTVRLPEGLGTAALGNLLT
GESIPVDAGARTVRLADAFRHMPWAALVIESGP
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgaggcgaatcacggcccggtcggcggcgatctcgggcggttgtgcgaacac
ttcggcattgcgacaggttatttcgacgctttcggcgtgcggtgcgaagtctccgcacgg
agcctcgtcgcgctgctcggcgaattcggcgtgaagctcgacaacgcgggcgatgcaggc
cgtgcactcgacgtagcacgccgtgcgcgctgggccgaggcattgccgcctgtgcaggtc
gtgcaggccggcaatcccgcatggtcggtgacgctgcgggtgccggcttcgatgggccgg
ctgcgctggcggatcggcgacgagcacggacgggaagtcgaaggcgaggtcgatgccgac
acgctgcatgaaaacggccgaagcgagatcgacggaacgctgctgtgcgaacgcgtgctg
catgtgccgctcgcgctcgaagccggctaccaccggctgcgcatcgagggccttcgcggc
gaaacgctgctgctcgccacgccgggccactgctatcggccgcccgcggtgcgcgagggc
ggccgcgtctggggcacggcggtgcagctctacagcctgcgctcgccgcgcaactggggc
atcggcgatttcggcgatctggaagacctcgcggtgcgcatgtcggcgcagggtgccgac
gtgatcggcctcaacccgctgcatgcgctgttcgcgagcacgccgtcgaacgcgagcccg
tacagcccgtcgtcgcgccagcaactcaacgtgctctacatcgatgtcgaagcggtcgac
ggcttcgcggactgcgcgccggcccgcgaccgggtgcattcgcccgacttccaggcgcgg
ctcgcggcactgcgcgcggcgccgttggtcgactacgccggcgtggcccaggccaagttc
gaagtgctggccttgctcttcggcgatttctgcgcgcggcacctgcccgccgagggcgcg
cccagcgaggagggccgggcattcctggccttcgtcgcggagcgcggcgaggcgctgcgg
cagcacgcgctgttcgaaacgctgcaggcccactttcttgagaccgaaggcggcgcgtgg
gattggcacgactggcccgcggcctggcgcgacgccgattctgccgaggtgaccgccttt
gccgtcgcgcacgcacagcgcgtgcagttccaccagtacctgcaatggctcgcgacgcgg
caactggcgcgggtggcggcacgctgcgaagcgctcggcatgggcgtcggcctgtacgtg
gatctcgcggtgtcggtcgaccgcgccggctccgacacctggggcgcgcagcgggtgttc
gcggacggcgccagcgtcggcgcgccgcccgacgagttcaaccccgcgggccagggctgg
ggcctgccgccgctgcggcccgaccgcctgcgtgaagacggctaccgcttcttcatcgag
acgctgcgcgccggcatgcgcggcgcgggcgcactgcgcatcgaccatgtgatgggactg
atgcggctcttctggattccgcagggccgcagcgcccgcgagggcgcgtacgtgtattac
ccgctcgcggagatgctggccatcgtcgcgatcgagagccaccggcaccgctgcatggtc
gtgggcgaagacctcggcaccgtcgaggacgcggtgcgcgaggcgctggcccgtgcagac
gtgctctcgtaccggctgctgtatttcgagaagcgccacgacggcggcttcaagccgccg
gaggcctatccggcggctgcgctggttgcaatcagcacgcacgacctcgcgaccttcgcc
gggtggtggaccgccgccgacctgcgcgagcggctcgcgctcgacctgttccccgacccc
gccatcttcgacaagcaattgatggaccgggcgcgggagcgcatcgaactgacgcaggcc
ttgcagcacgccggactgctctcgcgcgaggaggcggcagaggccgcagggctcgcgatg
ccgtcgccgcgcctcgtcgaggcggcgcatgccttcctggccgcgacgccctcggcgctg
ctgatggtgcagctcgaagacgtggccggcgtggtggcgcaggccaacatgcccggcacg
gtggaccagcatccgaactggcggcgcaagctccccgaaccggtcgccgtgctggcgaac
ggcgacggcatgcgcgggctgggcgaggcgctgcgcgcagcgcggccacgccgcatcgat
gccggcgaaggcgaatcgcccggcctgcagacccgcgtgccgcgcgccacctaccggctg
cagttccacaaggacttcggcttcgacgatgcgatccgcgtgctgccgtaccttgcgaag
ctgggggtgagccatgtgtactgctcgccgatccagcgcgcgcggccgggcagcatgcat
ggctacgacgtggtggcgcatgccgaggtgaaccccgagcttggcggcgaggagggcttt
gcgcgcttcgtcgcggcgctgaaggcgaacggcctcggccagttgctggacatggtgccc
aaccacatgggcgtgttcggcgccgacaacgcgtggtggatggacgtgctggagaacggg
ccggcttcgctttttgcgcagcacttcgacatcgactggcatccgctcaatgtcgagctg
accggcaaggtgctgctgccggtgctgggcgtgcactacggcgaggcgctggacaacggc
gagctcgtgctgcgcttcgaggacgccacgggcagcttcgccgtcacctattacgaccat
cggtttccgcttgcgccggagagctatccggtggtgctggagcgggcgctctcgcggctc
ggcgatgcggcggctgcggcgcggctcgccagcctttcgacggcgttcgggcacctgccg
ccgcgggacacgagcgatccgaaggcgcaggccgaacgcgtgcgcgacaaggaactgctc
aaggcccggctcgcgcgcctcgcggagcgccatccggcggttgccgaggcgctcgtcgct
tccgtggcggagctgaacctcgcgtcgcccgaagcgcgcgatgcgctgcaccggctcatc
gaactgcaggccttccggctcgcgcattggcgcgtggcggcggacgagatcaactaccgg
cgcttcttcgacatcaacgacctcgcggcggtgcggatggagcgcgacgaggtgttcgag
gccacccagtcgttcgcgctggacctcgcggcgtcgggcatggtggacggcttgcgcatc
gaccacccagacgggctctacgacccggcggactacttccgcaagctccaggaaggctac
gcccggcgcgccggactggtgctgccgacgcacgatgcagagggccggcccgcgcggccg
ctgtacgtggtcgccgaaaagatcgcgggcgcgcacgaggaagtgcctgagagctggcat
gtgcacggcaccaccggctaccgcttcgccaacgtggcgaacggcgtgctggtcgacacc
gccgccgaggccgccgtgctgcatgcatggcagcgcttcaccggcgagacggaggacttc
gccgcgatgtcgcgcgccggccggcgcgaggtgatgcgcaatgcgctgtcatcggaactg
aacgtgctttcgaccgagctgctgcgcatcgcgcgggctgaccgcagcacgcgcgactac
acgctcaatgcgctgaggcgcgcgctggccgaggtcggcgcgtgcatgccggtgtaccgg
acctacatcgtcgagcacccgtcggcgcaggacgagcgcttcatcgacgaggccgtgaac
gaggccgcgcgtcagagcggcgatgccgaccgcagcatcttcgacttcgtgcgcagcgcg
ctgcgtggcgaagccgtcgcttcggcgccggccgcgctcggcgagcgggtgcggcgcttc
gcggtgcgcttccagcagttcagcgcgccggtggcggcgaagggcgtggaagacacggcg
ttctaccgctactttccgctcagttcgctcaacgaggtgggcggagagcccgaccagttc
ggcatcgacgtggcgaccttccatgcgctcagtgccgaccgcgcgaagcgctggccgcac
accatgctcgcgacttcgacgcacgacaacaagcgctccgaagacgtgcgcaaccgcatc
gacgtgctctcggagatgcccgacgaatggatgcaggcgctgagccgctggcacggcctg
tgccgcggcgcgcgcaagaagctggaaaccggcgaggcgccgtcgcgcgccgacgaatac
ctgctgtaccagacgctgctgggcgccttgccgctgggcgggctcgacgcggccaccgcg
ccggccttcgccgaccgcatctggcagtacatgcagaaggccgcgcgcgaagccaagctg
cgcacgcgctggtcgcatcccgatgccgactacgaagccgcgctcgaaggcttcgtgcgc
gagctgctggccgatgcgaaagagggcggctgcctcgccgacatccagcgcctcgcggac
cggctcgcctggttcggcgcatggaacagcctcacgctcacgctgctgaagtacggctcg
cccggcgtgcccgatctctaccagggcagcgagctcatcgaactgagcctggtcgatccc
gacaaccggcggccggtggactacgcgctgcggcagcagcagctcgatgggctgcatgcg
atggccgaccaggacgggctcgccgcgcgcatcggcgacctggctgctgcgccgcacgat
gggcgcgcgaagctctggttcatctggcgattgctgtcgctcaggggccggcatccgctg
ctgtttcgcgaaggcggctacgagccgctggtggtcgaagggccgatggcgcggcatgtc
gtggcgttcgcgcgccagcatgaggggcagacgctggtgattgttgcgggccggttgttc
gtcgggctatcggcggacgccgcagcagcgccaacgctgccgccggccgcggcttggaac
ggcacgacggtgcggctgcccgaagggctcggcacggcggcgcttggcaacctgctgacc
ggtgaatccattccggtcgatgcaggtgcgcgcacggtgcggctggccgacgccttccgc
cacatgccgtgggcggcgctggtgatcgaaagcggtccctga
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