Variovorax paradoxus EPS: Varpa_3278
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Entry
Varpa_3278 CDS
T01392
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00480
Glutathione metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01210
2-Oxocarboxylic acid metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_3278
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Varpa_3278
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Varpa_3278
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ADU37463
UniProt:
E6VB14
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All DBs
Position
complement(3532555..3533814)
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AA seq
419 aa
AA seq
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MPSYQHIKVPAEGQKITVNADNSLNVPDQPIIPFIEGDGTGLDITPVMLKVVDAAVAKAY
GGKKKIHWMEVYAGEKSTKVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVA
LRQELDLYVCLRPIQYFEGVPSPVREPHKTNMVIFRENSEDIYAGIEFEAESDKAKKLIK
FLQDELGVKKIRFPNTSGIGVKPVSIEGTERLVRKAFQYAIDNDKPSVTIVHKGNIMKFT
EGGFRDWAYNLAAKEFGAELIDGGPWMKFKNPKTGKEITVKDSIADAFLQQILLRPAEYS
VIATLNLNGDYVSDALAAQVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSEI
LSAEMMLRHMGWIEAADLIISAMKKSIASKRVTYDFARLMEGATQVSCSGFGQVMIEHM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctatcagcacatcaaagtcccggccgaaggccagaagatcacggtcaacgcg
gacaactcgctgaatgtgcccgatcaaccgatcatccccttcatcgaaggtgacggtact
gggctggacatcacgccggtgatgctcaaggtggtggacgccgcagtggccaaggcctac
ggtggcaagaagaagatccactggatggaggtctatgccggcgagaagtcgaccaaggtg
tatggccccgacgtctggctccccgaggaaaccctgcacgccgtgcgcgactacgtcgtc
tccatcaaaggcccgctcaccacgcccgtcggcggcggcattcgctcgctgaacgtcgcg
ctgcgccaggaactcgacctctacgtgtgcctgcgccccatccagtatttcgaaggcgtc
cccagtccagtgcgcgagccgcacaagaccaacatggtcatcttccgtgagaactcggaa
gacatctatgccggcatcgaattcgaagccgaaagcgacaaggccaagaagctcatcaag
ttcctgcaggacgagctcggcgtcaagaagatccgcttccccaacacatccggcatcggc
gtgaagcccgtgtcgatcgaaggcaccgagcgcctcgtgcgcaaggcattccagtacgcc
atcgacaacgacaagcccagcgtgaccatcgtgcacaagggcaacatcatgaagttcacc
gaaggaggcttccgtgactgggcctacaacctggccgccaaggagttcggcgccgagctg
atcgacggcggcccgtggatgaagttcaagaacccgaagacgggcaaggaaatcaccgtc
aaggacagcattgccgatgcgttcctgcagcagatcctgctgcgccccgccgagtacagc
gtgatcgccacgctgaacctcaacggcgactatgtgtccgacgcgctggccgcacaggtc
ggcggcatcggcatcgctccgggcgcgaacctgagcgacaccgtcgcaatgttcgaggcc
acgcacggcaccgcgcccaagtacgccggcaaggactacgtgaaccccggctccgaaatc
ctctcggccgaaatgatgttgcgccacatgggctggatcgaagcggccgacctgatcatc
agcgcgatgaagaagtcgattgccagcaagcgggtgacctatgacttcgcgcgcctgatg
gaaggtgcgacgcaggtgagctgctcgggcttcgggcaggtaatgatcgagcacatgtaa
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