Variovorax paradoxus EPS: Varpa_3601
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Entry
Varpa_3601 CDS
T01392
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00630
Glyoxylate and dicarboxylate metabolism
vpe00710
Carbon fixation in photosynthetic organisms
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Varpa_3601
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Varpa_3601
Enzymes [BR:
vpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Varpa_3601
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADU37785
UniProt:
E6UYG1
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Position
complement(3894109..3895494)
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AA seq
461 aa
AA seq
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MKSSSSYLKYVDIGLEVDSEKNVVATYLIEKAVTSRLDGLAFLGSVAAESSTGTWTDVKT
ATAGANLIAGKVFAYDPAVGIAKIAYPIDLFEPGNISQLLTVIAGNAFGLADVSKLKLMD
ISLPKMYLASYLGPRHGIKGVYERLKIEKNIPIIGSIIKPKCGLTASEHAEICFDAWSGL
ASEGGTHGVDMVKDDEALTHQPAFGSDFYTRIRLSIDAMKRAEDISGRKKIYVPNVTSSN
VLESIRRADFVARLGGDAIMIDFVMGGCSLLHTLRNQDLGLIIHGHRTLFAALHRAQDFG
VDYMVWAKLFRVIGGDQVHTGTPAIGVMSSKKAAVLDIVASVTEATYLPSTSSASGLAQD
FDGLRSVLPICGAGLDPLTTEKIVKELGPRVALFAGGGVHGHPGGTRAGAASLRESVEAV
HSGTSFEDFAATRNVPWLNEALKHFGAFDKQSPNSDAGVNM
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcgagttcatacctgaaatatgttgatatcggtcttgaagttgattcggaa
aaaaatgtggttgcgacttatctgatagagaaagcggtgacttctcgactggatggcctc
gcattcttaggctcagttgcggcagaatcatcgaccggaacctggaccgatgtaaagacc
gcgaccgccggggcaaacctgattgcgggcaaggtcttcgcctatgatcccgctgtaggc
atagcaaaaattgcgtatccaattgatttatttgaacctggcaatataagtcaattgctg
acggttattgccggtaatgcattcggccttgccgatgtttccaagctgaagctgatggat
atatcgctcccaaaaatgtatttggcgtcctaccttggaccaaggcatggaataaagggc
gtgtatgagcggttaaaaatagaaaaaaatatcccgatcatcggatctattatcaaaccg
aaatgcggcctcacggcaagcgaacacgccgagatttgtttcgacgcctggtctggactt
gctagtgaaggcggaacgcacggtgtcgatatggtcaaggatgacgaagcccttacgcac
cagccggcattcggcagtgatttttacacacggattcgcctttcgattgacgccatgaaa
agggcggaagatatcagtggtcgaaagaaaatctatgtgccgaatgtcacgtcgtccaac
gtattggaatcgataaggcgagctgattttgttgcgagactggggggagacgcaatcatg
atcgactttgtgatgggcggttgctctcttcttcataccctgcgaaatcaggacctgggc
ctcattattcacgggcacagaaccctttttgccgcattgcatcgagcccaggattttggt
gttgattacatggtttgggcgaaattattccgagtaattggaggggatcaggttcacacg
ggcacaccagccataggcgttatgagttccaaaaaagccgctgtactcgatatcgttgca
tcggttacggaagcgacttatctaccctcaacctcctcagcgtcagggctggcccaggat
ttcgatggattgcgttctgttttgcctatttgcggcgctggtcttgatcctttgactacg
gagaaaatcgttaaagagcttggtccaagagtcgccctgttcgcgggaggcggggtgcat
ggtcacccgggtggcacccgcgccggcgccgcgtctcttcgagaatcggtggaggcggtg
catagcgggacgtcatttgaagattttgcggcaacaaggaatgttccttggctgaacgaa
gcattgaagcatttcggcgcatttgataagcagtccccaaattccgacgccggggtgaat
atgtga
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