Variovorax paradoxus EPS: Varpa_3719
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Entry
Varpa_3719 CDS
T01392
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00785
Lipoic acid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01210
2-Oxocarboxylic acid metabolism
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_3719
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Varpa_3719
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Varpa_3719
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ADU37903
UniProt:
E6V0V7
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All DBs
Position
complement(4008743..4011619)
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AA seq
958 aa
AA seq
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MSDSSTPTAYTAYQGNTYLFGGNAPYVEEMYENYLSNPGSVPDNWRSYFDALQNVPAADG
TNTRDVPHLPVINAFAERAKQGTTKVVQASGADSELGRKRTAVQQLIAAYRNVGARWADL
DPLKRAERPAIPELEPSFYGFADADLETVFNTSNTFFGKETMSLRDLLNALRETYCGTMG
AEYMYTTDQNHKRWWQQKLESARTNPKLSAEQKKHVLNRLTAAEGLERFLHTKYVGQKRF
SLEGGESFIVSMDELITQAGVKGVQEIVIGMAHRGRLNVLVNSLGKMPADLFAEFDHTAP
EELPSGDVKYHQGFSSDVTTPGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRADPLGK
QVLPVIVHGDAAFAGQGVVMETLALAETRGYSTGGTVHIVINNQIGFTTSDPRDSRSTLY
CTDIVKMVDAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLGHNEQDTPS
LTQPLMYKKIAQHPGTRKLYADKLAAQGLGDTLGDDMVKAQRAAFDEGKNTVDPVLTNFK
SKYAVDWSPYLNKKWTDAGDTAIPSSEWKRLAEKITTVPQGFTVHPLVKKVLDDRAAMGR
GDVNVDWGMGEHMAFASLVASGYPVRLSGEDSGRGTFTHRHAVLHDQNREKFDEGTYTPL
QNVAENQAPFVVIDSILSEEAVLAFEYGYASNDPNTLVIWEAQFGDFVNGAQVVIDQFIA
SGEVKWGRVNGLTMMLPHGYEGQGPEHSSARLERFMQLSADTNMQVVQPTTASQIFHVLR
RQMVRNLRKPLIIMTPKSLLRNKDATSPLSEFTKGSFQTVIPDSKGLKAEKVKRLIACSG
KVYYDLAKKREEQGNDDVAIIRVEQLYPFPHKAFAAEIKKYPNLTDVVWCQDEPQNQGAW
FFVQHYIHENMQEGQKLGYSGRAASASPAVGYSHLHQEQQKALVDGAFGKLKGFVLTK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcctctacgcccacggcgtacaccgcctatcaaggcaacacctacctcttc
ggcggcaatgcgccctatgtcgaggagatgtacgaaaactacctctccaaccccggcagc
gttcccgacaactggcgttcgtacttcgacgccctgcagaacgttcccgccgccgacggc
accaacacccgtgacgtcccgcacctgccggtcatcaatgctttcgccgaacgcgcgaag
cagggcacgaccaaagtcgtgcaggccagcggcgccgactccgaactcggtcgcaagcgc
accgccgtccagcagctgatcgccgcctaccgcaacgtcggcgcacgctgggccgacctc
gatcccctgaagcgcgccgagcgcccggccattccggaactcgagccctcgttctacggc
ttcgccgatgccgatctcgagacggtgttcaacaccagcaacaccttcttcggcaaggag
accatgtcgctgcgcgacctgctcaatgccttgcgcgaaacgtactgcggcaccatgggc
gccgagtacatgtacaccaccgaccagaaccacaagcgctggtggcagcagaagctcgaa
agcgcgcgcaccaacccgaagctgagcgccgagcagaagaagcacgtgctcaaccgcctg
accgcggccgaaggcctcgagcgcttcctgcacaccaagtacgtcggccagaagcgtttc
tcgcttgaaggcggcgaaagcttcatcgtctcgatggacgaactgatcacccaggccggc
gtcaagggcgtgcaggaaatcgtgatcggcatggcccaccgcggccgcctgaacgtgctg
gtcaattcgctcggcaagatgccggccgacctgttcgcagagttcgaccacaccgccccc
gaagagctgcccagcggcgacgtgaagtaccaccagggcttcagctcggacgtgaccacc
cccggcggcccggtgcacctgagccttgcgttcaacccctcgcaccttgaaatcgtgaac
cccgtggtcgaaggctcggtgcgcgcccgcatggaccgccgcgccgacccgctgggcaag
caggtgctgcccgtgatcgtgcacggcgacgccgccttcgcaggccagggcgtcgtgatg
gaaacgctggcgctggccgaaacccgtggctactccaccggcggcacggtgcacatcgtc
atcaacaaccagatcggcttcaccaccagcgacccgcgcgacagccgctcgacgctgtat
tgcaccgacatcgtcaagatggtcgatgcgccggtgctgcacgtgaacggcgacgacccc
gaagccgtggtgctcgccacccagctcgcgctggagttccgcatggaattccagaaggac
gtggttgtcgacatcatctgcttccgcaagctgggccacaacgagcaggacacgccctcg
ctcacccagccgctcatgtacaagaagatcgcccagcaccccggcacgcgcaagctgtac
gccgacaagctggccgctcagggcctgggcgacacgctcggcgatgacatggtcaaggcg
cagcgcgccgcgttcgacgaaggcaagaacaccgtcgatccggtgctcaccaacttcaag
agcaagtacgccgtcgactggagcccgtacctcaacaagaagtggaccgacgccggcgac
accgccattccgtcgtccgagtggaagcgcctggccgagaagatcaccaccgtgccgcaa
ggcttcaccgtgcatccgctggtgaagaaggtgctggacgaccgcgccgccatgggccgc
ggcgacgtcaacgtcgactggggcatgggcgagcacatggccttcgcctcgttggtggcc
agcggctacccggtgcgcctgtcgggcgaagactcgggccgcggcacgttcacgcaccgc
cacgccgtgctgcacgaccagaaccgcgagaagttcgacgaaggcacctacacgccgctg
cagaacgtggccgagaaccaggcaccgttcgtcgtgatcgactcgatcctgtccgaagaa
gccgtgctcgcgttcgaatacggttacgcctcgaacgacccgaacacgctcgtcatctgg
gaagcccagttcggcgacttcgtgaacggcgcgcaagtggtgatcgaccagttcatcgct
tcgggcgaagtgaagtggggccgcgtcaacggcctcacgatgatgctgccgcacggctac
gaaggccagggccccgagcacagctcggcacgcctggagcgcttcatgcagctgagcgcc
gacaccaacatgcaggtggttcagcccaccaccgccagccagatcttccacgtgctgcgc
cgccagatggtgcgcaacctgcggaagcccctgatcatcatgacgcccaagtcgctcctg
cggaacaaggacgcgacctcgccgctgtccgagttcaccaagggcagcttccagaccgtc
attcccgacagcaagggtctgaaggcagagaaggtcaagcgcctgatcgcctgctcgggc
aaggtctactacgacctggccaagaagcgcgaggagcagggcaacgacgacgtggcgatc
atccgcgtcgagcagctctacccgttcccgcacaaggcctttgccgccgagatcaagaag
tacccgaacctcacggacgtggtgtggtgccaggacgaaccgcagaaccagggcgcctgg
ttcttcgtgcagcactacatccacgaaaacatgcaggaaggccaaaagctcggctactcc
ggccgtgccgcttcggcatcgccggcggtcgggtattcgcacctgcaccaggaacagcag
aaggcgctcgtcgatggcgcatttggcaagctcaagggcttcgtgctgaccaagtaa
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