Variovorax paradoxus EPS: Varpa_4198
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Entry
Varpa_4198 CDS
T01392
Name
(GenBank) transcriptional regulator, AraC family
Organism
vpe
Variovorax paradoxus EPS
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DUF6597
HTH_AraC
HTH_23
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADU38368
UniProt:
E6V772
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Position
complement(4529152..4530021)
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AA seq
289 aa
AA seq
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MAERLFLRLVDDPLHGPESGVPAGTLRAVPVSAALQAHVSHILLYRETFAAGQEVHERVL
PDGAVRLVFNLGDAPSAGDGAGLPVEAIGASTAPVVVRMRDTVEGISVTLRPGAAAALLG
LPAGEIAGQAVHLDELWQGGAAELLARMAEAPDDAARAALLQSALERRLRGGGGAVHAAA
MHAARLIAESGGRKPLRDVAAAVGVGERRLQQLFHAHVGLSPRAWARLARLHDCLRALRM
QPAPAWADVAVESGFYDQSHLVNEFRALCGVTPTEFMGHAISGSSKTPG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacgcctcttcctgcgcctcgttgacgaccctctgcacggccccgaatcgggc
gtgcccgccggcacgctgcgcgcggtgccggtgagcgccgcgttgcaggcgcatgtctcc
cacatcttgctgtaccgcgagaccttcgcggcgggacaagaggtgcatgaacgcgtgctg
cccgacggcgcggtgcgcctggtcttcaatcttggcgatgcgccttccgcgggcgatggg
gcggggttgccggtggaggcaatcggcgcttccaccgcgccggtcgtggtgcgcatgcgc
gacacggtggagggaatctccgtcacgctgcggcccggtgcggcggctgcactgctgggc
ttgcctgccggcgagattgcgggtcaggccgtgcacctggacgagctctggcagggcggc
gcggccgagctgctggcgcgcatggccgaggcacccgacgatgccgcgcgggcagcgttg
ctccagtctgcgttggagcgccggctgcgcggtggcggcggtgccgttcacgccgccgcg
atgcacgcagcccgcctcatcgccgaatcgggcgggcggaaaccgttgcgcgatgtggct
gcggccgtcggtgtcggcgagcggcgcttgcagcaactctttcacgcacacgtcgggctg
tcgccgcgtgcctgggcgcggctcgcgcggctgcacgactgcctgcgtgctctgcgaatg
caacctgcgccggcctgggccgatgtcgcggtcgagagcggtttctacgaccagtcgcac
ctggtcaacgaattccgtgcgctctgcggcgtcacgccgaccgagttcatggggcacgcg
atttcgggttcttccaagacgcccggctga
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