Variovorax paradoxus EPS: Varpa_5739
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Entry
Varpa_5739 CDS
T01392
Name
(GenBank) D-xylose ABC transporter, periplasmic substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5739
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Varpa_5739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ADU39891
UniProt:
E6UWG1
LinkDB
All DBs
Position
complement(6246643..6247665)
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AA seq
340 aa
AA seq
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MQLKQTLAAMAFGLTAVSALAQTVVGVSWSNFQEERWKTDEAAIKAQLEKLGAKYISADA
GGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAITKATRQKVPVVAYDRLIEAPGVFY
ITFDNVEVGRMEAREVLKVKPKGNYVIIKGSPSDPNADFLRAGQQEVLEPSVKKGDIKIV
GDEYTEGWKPEVAQKNMEQILTKNANKVDAVVAANDGTAGGAVAALTAKGLRGVPVSGQD
ADFAALNRIALGTQTATIFKDSRELGREAASAAIALSQGKPVEKAAQWNSGPKKVALSSR
LLTPVPVTRDNLDVVVKAGWIKKDELCKGVPAASAPAACK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaacaaactttggccgccatggccttcggcctcaccgccgtgagcgcactg
gcccagaccgtggtcggcgtgagctggtccaacttccaggaagagcgctggaaaaccgac
gaggcggccatcaaggcgcagctcgaaaagctcggcgctaagtacatcagcgccgacgcg
ggcggctcgcccgaaaagcagctgggcgacatcgagggcctgatgtccaagggcgccaag
gcgctcatcgtgctggcgatggacaaggacgcgatcctgcccgccatcaccaaggccacg
cgccagaaggtgcccgtggtcgcgtacgaccgcctgatcgaagcgcccggcgtcttctac
atcaccttcgacaacgtcgaggtcggccgcatggaagcgcgcgaggtgctcaaggtcaag
cccaagggcaactacgtgatcatcaagggctcgccgagcgacccgaacgccgacttcctg
cgcgcgggccagcaggaggtgctggagccctccgtgaagaagggcgacatcaagatcgtc
ggcgacgaatacaccgaaggctggaagccggaggtcgcgcagaagaacatggagcagatc
ctcaccaagaacgcaaacaaggtcgacgcggtggtggctgccaacgacgggaccgccggc
ggcgcggtcgcggcgctcacggccaagggcctgcgcggcgtgccggtgtcgggacaggac
gcggacttcgcggcgctcaaccgcatcgcgctgggcacgcagaccgccaccatcttcaag
gactcgcgcgagctcggccgcgaagccgcctcagcggccatcgcgctgtcgcagggcaag
ccggtcgagaaggccgcgcagtggaactcgggcccgaagaaggtcgcactgtcgtcccgc
ctgctcacgccggtgcccgtcacgcgcgacaacctcgatgtcgtcgtgaaggccggctgg
atcaagaaggacgagctctgcaagggcgtccccgccgccagcgcacccgcggcctgcaag
taa
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