Variovorax paradoxus EPS: Varpa_5989
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Entry
Varpa_5989 CDS
T01392
Name
(GenBank) putative transmembrane protein
Organism
vpe
Variovorax paradoxus EPS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4178
DZR
IBR
Zn-ribbon_8
TF_Zn_Ribbon
ODV-E18
zinc-ribbons_6
DNA_ligase_ZBD
HypA
Ribosomal_S27e
HVO_2753_ZBP
Zn_Tnp_IS1595
Elf1
DZR_2
zf-Mss51
GpA_ATPase
DUF6366
Motif
Other DBs
NCBI-ProteinID:
ADU40141
UniProt:
E6V032
LinkDB
All DBs
Position
complement(6513277..6514764)
Genome browser
AA seq
495 aa
AA seq
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MAEETGNQRYYRAPCPGCGAPVEFRSAQSTHAVCPYCQSTVVRQGETLARTGKMAELFDD
FSPLQLFATGRIQDKPFTLIGRLQYTYPGGRWTEWIAALDDERTAILSEDNGAYVFALPF
DLQRTAPPPVDLRVGATSAFAGQSYTVTSNEQVALTSAQGELPHLPDLGRPFAMVELRND
KGLVLSIDYGTARPSAYLGRSVQLEDLQLSGLREESAKDEKGRSFNCPNCGSPVTVSLEG
SKSITCRSCNSIIDLSQGIGGELKHAAQDEPVRPLIALGTMGQLQGAQWQVVGFQHRMGV
EPGDDEYFGWDEYLLYNKKRGFSFLVDAEDGWSMVKPTTGAPVMAENGSTATYLSKSYQQ
QYAYNAETTYVAGEFYWQVERGQKTFNRDFASGPALLSMERSANELTWSSGIKLDSGVVA
TAFKLDAKKDMFKRGDALPVSAASGMGCGTIILIIVVIIILLIILSTCSGRGGSSSGYRS
SGGSYGGSSSGGGHK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaaaccggcaaccaacgctactaccgcgcgccctgccccggctgcggcgca
ccggtcgaattccgctcggcgcaatcgacgcacgcggtctgcccctactgccagagcacc
gtcgtgcgccagggcgagacgctcgcgcgcaccggcaagatggccgagctcttcgacgac
ttcagcccgctgcagctctttgccaccggccgcatccaggacaagcccttcacgctgatc
ggccggctgcaatacacctaccccggcggccgctggaccgaatggatcgccgcgctcgac
gacgaacgcaccgcgatcctcagcgaggacaacggcgcctacgtcttcgcgctgcccttc
gacctgcagcgcaccgcgccgccaccggtcgacctgcgcgtgggcgccaccagcgcgttc
gcgggccagagctacaccgtcacctcgaacgagcaggtcgcgctgacttccgcacaaggc
gagctgccgcacctgcccgatctcggccggccgttcgcgatggtcgagctgcgcaacgac
aaggggctggtgctcagcatcgactacggcaccgccaggcccagcgcgtacctcggccgc
tcggtgcagctcgaagacctgcagctctccggcctgcgcgaggaatcggccaaggacgaa
aagggccgcagcttcaactgccccaactgcggctcgccggtcaccgtcagcctggagggc
agcaagagcatcacctgccgctcgtgcaacagcatcatcgatctgtcgcagggcatcggc
ggcgagctcaagcatgcggctcaggacgagccggtgcgtccgctcatcgcgctcggcacc
atgggccagctgcagggtgcgcagtggcaggtggtgggcttccagcaccgcatgggcgtg
gagcccggcgacgacgagtacttcggttgggatgagtacctgctctacaacaagaagcgc
ggcttcagtttcctggtggatgccgaagacggctggagcatggtcaagccgaccaccggc
gcgccggtgatggccgagaacggcagcaccgccacctacctcagcaagagctaccagcag
cagtacgcctacaacgccgagaccacctacgtggcgggcgagttctactggcaggtcgag
cgcgggcaaaaaaccttcaaccgcgacttcgccagcggccccgcgctgctgtcgatggag
cgctcggccaacgagctcacctggtcgtcgggcatcaagctggacagcggcgtggtcgcg
accgcgttcaagctcgacgcgaagaaggacatgttcaagcgcggcgacgcgctgccggtg
agcgccgcctcgggcatgggctgcggcacgatcatcctgatcatcgtggtgatcatcatc
ctcttgatcatcctgagcacctgcagcggccgcggtggctcctcgagcggttaccgcagc
tcgggcggctcgtatggcggctcctcgagcggcggcggccacaaatga
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