Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_01790
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Entry
M634_01790 CDS
T02761
Symbol
malS
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00500
Starch and sucrose metabolism
vpf01100
Metabolic pathways
vpf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
M634_01790 (malS)
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
M634_01790 (malS)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF5640
DUF6034
Motif
Other DBs
NCBI-ProteinID:
AGQ89705
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Position
I:355928..358012
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AA seq
694 aa
AA seq
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MKKTILALSIGLLSACSQIPENAIVLSVGDDTAVFEPNSDGLLVAEQKLEKGNYTFTIAD
SKQTCGNSFALAEESRIKFNTPLKMDNCATDTSMPLRIFKANTYLFTLNPDTNELTVKIK
PKQSQDITYSCPVATDTAKTINVAQTFTDGTVVRDALTGQEATVANGSVTMQPGPMSQGL
LLLEEVEQQADKPFSWDNATVYFVMTDRFYNGNPDNDNSYGRSKDGKYEIGTFHGGDLAG
LTKKLDYIESLGVNAIWITSPLEQIHGWVGGGDKGDFKHYGYHGYYHQDWTKLDANMGTE
DELRTFVDTAHKKGIRVIWDVVMNHTGYATLADMQEFGFGQLYLDDQEAKQVLGEEWTDW
QPKSGQSWHSFNDYIKYGDSEAWEKWWGKDWIRTDIGDYDAPGYNDITMSLNYLPDLKTE
STQKTGLPNFFRNKNTNAQDELKTPREHLITWLSDWVRDYGIDGFRVDTAKHVEMEAWAE
LKARTTQALAEWKQNHPDKALDDLPFWMTGEVWAHSVVKSPYFDNGFDSIINFEFQSDVA
PKALKCFAQLDNDYRRYAERINSDPEFNVLSYLSSHDTQLFWSARSRSFDDQARAANALM
LAPGAVQIYYGDEIARDFGVTGSDPTQGTRSDMPWDKIHGEREDLLQHWQKLGEFRQRHP
AVAQGKHITRNQEGYYAFERQYQDDKVLIVYTGE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaattctcgcactctctatcggcctactgagcgcctgcagccaaattcca
gaaaatgccatcgtattaagcgttggagacgatactgccgtcttcgaaccaaactcagac
ggtttactcgtcgcagagcaaaaactagaaaaaggcaactacacctttaccattgccgac
agcaaacaaacctgtggcaacagctttgcgctagcggaagaaagccgcattaaattcaat
acaccattaaaaatggataactgcgcaaccgacacatctatgccgttgcgcattttcaaa
gccaatacctacctcttcacgctcaatccagacaccaatgagctaaccgttaaaatcaaa
ccaaaacagagtcaggacatcacctattcttgccctgttgcaaccgacacagctaaaacc
atcaacgtagcccaaacctttactgatggcactgttgttcgtgacgccttaaccgggcaa
gaagccaccgtcgccaatggcagcgtaaccatgcagccgggtcctatgagtcaaggtctg
ttgttactagaagaggttgagcaacaagccgataaacctttcagctgggacaacgcaacg
gtgtattttgtcatgaccgaccgcttctacaatggtaacccagacaatgacaacagctac
ggtcgcagcaaagacggcaaatacgagattggtaccttccacggtggtgacttagcgggt
ctgacgaaaaaactcgattacatcgaatccctcggtgtgaatgccatctggataacttca
ccactggaacaaatccacggctgggttggcggcggcgataaaggcgactttaaacactac
ggctatcacggctactaccaccaagattggaccaagcttgatgccaacatgggtaccgaa
gatgagctgagaaccttcgtcgataccgcccacaagaaaggtatccgcgtgatttgggat
gtggtcatgaaccacactggctacgccacattagccgacatgcaagaatttggatttggt
caactttaccttgatgaccaagaagccaaacaagtacttggagaggaatggaccgactgg
caaccaaaatcgggacaaagctggcacagcttcaacgactacatcaaatacggtgatagt
gaagcgtgggaaaaatggtggggcaaagattggattcgcaccgacattggcgattacgat
gcgccgggatacaacgacatcaccatgtctttgaactacctaccggatctcaaaaccgaa
tcgacgcagaaaaccggactaccaaacttcttccgcaataaaaacaccaatgcgcaagat
gaattgaaaacccctcgagaacatctgatcacatggctatcggattgggtacgtgattac
ggcattgatggcttccgcgtcgataccgccaaacacgttgagatggaagcgtgggcagag
cttaaagcaagaaccactcaagccctcgccgaatggaaacaaaaccaccccgacaaagca
ctagacgatctgccattttggatgaccggcgaagtgtgggcacacagcgtggtgaagagc
ccgtatttcgataacggcttcgattcgatcatcaacttcgagttccaatctgacgtggca
ccaaaagcgctaaagtgtttcgctcaacttgataatgattaccgccgctatgcagagcgt
attaactccgatcctgaattcaacgtgttgagttacctgtcttcgcacgatactcaactg
ttttggtcggcacgcagccgcagctttgatgaccaagctcgcgccgccaatgcgttaatg
ctggcaccgggtgcagtacaaatctactacggcgatgagattgcccgtgactttggcgtg
actggatccgatccgacccaaggtacacgttccgacatgccatgggacaagattcatggc
gagcgtgaagacttactacaacattggcagaaattgggcgaattccgtcaacgccaccca
gcggttgctcaaggtaagcacatcactcgtaatcaagaaggctactacgcgttcgaacgc
caataccaagacgacaaagtactgattgtttacactggcgaataa
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