Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_05160
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Entry
M634_05160 CDS
T02761
Name
(GenBank) recombinase
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_05160
DNA repair and recombination proteins [BR:
vpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M634_05160
TLS (translesion DNA synthesis) factors
Other SOS response factors
M634_05160
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_22
RsgA_GTPase
CcmH
Motif
Other DBs
NCBI-ProteinID:
AGQ90250
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Position
I:complement(1061230..1062894)
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AA seq
554 aa
AA seq
DB search
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRADAGMVRQGEE
KTEVSAAFLLDNNLHATRWLEDNDLLDGTECILRRIITKEGRSRAFINGSPVPLSQLKSL
GQLLINIHGQHAHHQLMKSEYQMAMLDQYAGHLNLLKSTRSAYQHWRQADNNLKQLKENS
QQNQAQKQLLEYQIKELNELSLGEEEFAELEQEHKRLSNSGELAATCQQALELIYEGEEV
NALGILQSANHSLIQLAELDEKLAELPNMLADAMIQLEETKNELRSYLDGIDVDPGRMAY
VEERFSKVMSMARKHHVMPDELYQHHQDLLAQIEALDCSDERLDELAQEVEQKYQSFLTQ
AEKLHKSRSRYAKELNKLITQSMHELSMEKAVFSIEVNNENTHPSPLGMDSVCFLVSTNP
GQPLQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQMFVAKHTKGGQTETQMRALDEEQRVAELARLLGGSQIT
DSTLANAKELLIAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcatctaagtgttaataattttgcgattgttaagtctttacaactcgagctt
tctaagggcatgaccaccattacaggtgaaacaggcgctggtaaatctattgcgattgat
gcgttaggtctgtgcctaggcggacgtgccgatgcaggtatggtgcgtcaaggtgaagag
aaaaccgaagtcagtgccgcctttttactggacaacaacctacatgcaacgcgttggcta
gaagataacgatctgctggatggcactgaatgtatcttgcgtcgcatcataactaaagaa
ggccgttcaagagccttcatcaacggcagcccagtaccactttcacaattaaaatctctt
gggcagctgttaatcaacatccatggacaacacgcgcatcaccaactgatgaaaagcgaa
taccaaatggcgatgttggatcaatatgccggacacttaaatctattaaagagtacacgc
agtgcgtaccaacattggcgtcaggcagacaataacctcaagcaactcaaggaaaacagc
cagcagaatcaggcgcaaaaacagttgcttgaataccaaatcaaagaactgaatgagcta
tcgctaggtgaagaagaattcgcagaactcgagcaagagcacaaacgactgtccaatagc
ggtgaactcgccgctacctgtcagcaagccctcgaacttatttacgaaggtgaagaagtc
aatgcgcttggtattttgcaatcggccaatcactccctaattcaattagcggaattagat
gaaaaattagccgagctaccaaatatgctggctgacgcgatgatccagctagaagaaacc
aaaaacgaacttcgtagctacttggatggcatcgatgtcgatccaggtcgtatggcttat
gtcgaagagcgtttttctaaagtgatgtcgatggctcgtaagcatcatgttatgcctgat
gagttataccaacatcaccaagaccttctagcacaaatcgaagcattggattgctctgat
gaacgtctggatgaattggctcaagaagtggaacagaaataccaaagcttcctgactcaa
gcggaaaagctgcataaatcacgcagccgttacgcaaaagaactgaacaagctgatcacg
caaagcatgcacgaactgagcatggaaaaagccgtcttcagcattgaagtaaacaacgaa
aacacacatccgtcgccattggggatggacagtgtgtgcttcttggtctccactaacccg
ggtcaacctttacaaccaattgcgaaagttgcgtcaggtggtgagttatcccgtatctcg
ctagcgatccaagtgatcactgctcaaaaagtagatacgccaagtttgatcttcgatgag
gtggacgtgggtattagtggtccaacagctgcggtagtaggcaaaatgctacgtaagctt
ggagaatcgacccaagtcatgtgtgtcactcacttaccgcaagtagccggttgtggccac
caacaaatgtttgtcgcaaaacacaccaaaggcggtcaaacggaaacacaaatgcgcgca
ctagatgaagaacaacgtgtggcagaactggctcgtttactcggtggtagccaaatcact
gattcaacattagctaacgcgaaagaactccttatcgccgcctaa
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