Vibrio parahaemolyticus UCM-V493: VPUCM_0168
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Entry
VPUCM_0168 CDS
T03116
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_0168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_0168
Transporters [BR:
vph02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VPUCM_0168
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
DUF87
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHI98126
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Position
1:187157..188014
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AA seq
285 aa
AA seq
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MENDVILSVKDLEVEFITDDGPVKVLHGVNFDVRAGRTLGLVGESGSGKSVTSMSIMGLL
PKPYGNIVNGEVNYRGTNLVSLPAEEMYAMRGDRISIIFQDPMTALNPVHTIGRQLCEVL
ELHRPELGKKERESYAVEMLAKVKIPMPEKRLNEYPHNLSGGMRQRVMIAMALACKPDIL
ICDEPTTALDVTVQASILELMNELQEETGMAMIFITHDLGVVAEVCDDVAVMYGGRIVEK
AEIFELFDNPQHPYTERLMGLMPSLDNEPKQMIDIKPIDASMFAS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgatgtaattttgagtgtaaaagacctcgaagtggaattcatcacggatgat
ggtccggtaaaagtactccatggcgtgaactttgatgttcgcgcaggacgaacgctcggt
ctcgttggtgagtctggcagtggtaagagcgtgacctcaatgtccatcatgggactgttg
ccaaagccttacggcaatattgtcaatggtgaagttaactaccgaggtaccaatctggtg
tcgctaccagcggaagaaatgtacgccatgcgcggcgaccgcatttcgatcattttccaa
gacccaatgacggcgttgaatccagtgcataccattggtcgccaactgtgcgaagtgttg
gaattacaccgtcctgagttaggtaaaaaagagcgcgaatcctatgcggtagaaatgctg
gctaaagtgaaaattccaatgccagaaaagcgcctcaacgaatacccgcacaacctatct
ggtggtatgcgccagcgcgtgatgatcgcaatggcactcgcatgtaaaccagacattttg
atttgtgatgagccaacgacagcgctggatgtaacggtacaggcgtctatccttgaacta
atgaatgaacttcaagaagaaacgggcatggcaatgatcttcattacccatgatttaggc
gtagtcgctgaagtgtgtgatgacgttgcggtaatgtatggtggtcgtattgtagaaaaa
gcggagatttttgagctgtttgacaatccgcagcacccttacacggaacgtttgatgggc
ttaatgccaagcttggacaacgaacctaagcagatgattgatatcaaaccaatcgatgcc
agcatgtttgcgagctaa
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