Vibrio parahaemolyticus UCM-V493: VPUCM_2198
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Entry
VPUCM_2198 CDS
T03116
Name
(GenBank) Ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vph03009
]
VPUCM_2198
Enzymes [BR:
vph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
VPUCM_2198
Ribosome biogenesis [BR:
vph03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VPUCM_2198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHJ00157
LinkDB
All DBs
Position
1:2373640..2374338
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AA seq
232 aa
AA seq
DB search
MSSRTGHEKGRRTSQSKTGHFKRSGKPNRVEDQTTRRHPTRTAKANKPRVDLQNRKVIVF
NKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQPKSK
SPKTYWVQVDGAPQEQDLEKLRKGVELKDGMTLPAKVEVIDAPTIWERNPPVRFRANIPT
TWLAITIVEGRNRQVRRMTAHIGFPTLRLVRYSMGDITLGDLQPGQWKEIQL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcgcacaggtcatgaaaaagggcgtcgtaccagccaatctaaaacaggccat
tttaaacgttccggtaaaccaaaccgtgtagaggatcaaaccacaagacgccaccctact
cgcacagccaaagccaataaacctcgagtcgacctgcaaaatagaaaagtcattgttttc
aataagccttacgatacgctgagccaatttaccgatggtgacggccgtaaaacattggct
gactacattccaatcaaagacgtctacgcagcaggtcggctagacagagacagtgaaggc
ctaatggtgctaaccaatgatggtatcctgcaagcgaagctgactcagccgaaatcaaag
tcgccgaaaacgtattgggtacaggtggatggagcgccacaagagcaagatttagagaag
ttgcgtaaaggcgttgaattaaaagatggtatgaccttacccgcaaaagtagaagtcatt
gatgctccgacgatttgggagagaaacccaccagttcgttttcgtgcaaatattccaacg
acatggctagcaatcactatcgttgaaggtagaaaccgccaagtaagacgcatgaccgct
catatcggcttcccaactttacgcttagtacgctattcaatgggcgacattacccttgga
gacttgcagcctggccaatggaaagagattcagctctag
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