Virgibacillus dokdonensis: A21D_00919
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Entry
A21D_00919 CDS
T05261
Symbol
oppF_3
Name
(GenBank) Oligopeptide transport ATP-binding protein OppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A21D_00919 (oppF_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpn02000
]
A21D_00919 (oppF_3)
Transporters [BR:
vpn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A21D_00919 (oppF_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
DUF5906
AAA_22
RsgA_GTPase
AAA_29
AAA_16
PRK
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AUJ24031
UniProt:
A0A2K9J1Z2
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All DBs
Position
complement(998594..999553)
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AA seq
319 aa
AA seq
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MAKAILEVNRLKKFFEVNRNQTLQAVNDVSFQISEGETFGLVGESGCGKSTIGRTILGLY
HKTAGEVLYDGKDIHGLKENDRFKLHKKMQMIFQDPYASLNPRSTVQEIISEPMEIHRLY
RHKKEIKERVYQLLEEVGLQRDHANRYPHEFSGGQRQRIGIARALALNPEFIIADEPISA
LDVSIQAQVVNLLKKIQYEKGLTFLFIAHDLSMVKQISDRIGVMYLGNLIELTKSEQLYD
HPYHPYTKALLSAIPIPDPEVEEKRERIILQGELPSPINPPSGCVFRTRCPMAMRICEQQ
KPQFREITPEHFVACHLYS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaattctcgaagtaaaccgtctgaagaaattttttgaagtgaacagaaac
cagacgctacaggctgtcaatgatgtatcgtttcaaataagcgaaggagagacatttggc
ttagtaggggagtcgggttgtggtaaatctacgattgggcgaaccattctcggtttatac
cataagacagctggagaagtcttgtacgacgggaaggatattcatggtttaaaagaaaat
gatagattcaagttgcataaaaaaatgcaaatgatttttcaagatccgtatgcctcatta
aaccctcgatctactgtacaggaaattatctctgagccaatggaaatacatcgtttgtat
cgacataagaaggaaataaaagaacgagtataccaattattagaagaggtaggtttacag
cgggatcatgctaatcgttatcctcatgaattcagtggcggtcaaaggcagcgtataggt
attgcaagggcgctcgctttaaatccagagttcattattgcagatgaaccaatttcggct
ttggatgtttccatacaggcgcaagtcgtcaatttattaaagaaaattcaatatgaaaaa
ggattaacgtttttatttattgcccatgatttatcgatggtgaagcaaatttctgatcga
attggcgtcatgtacttagggaatttaatcgaacttacaaaatcagaacagctatatgac
catccctaccacccgtatacaaaggcgctattgtctgcaatccctattccagatccagaa
gtcgaagaaaagcgagaacgaattatattgcaaggtgaactcccaagtccgattaacccg
ccgagcggatgtgtgtttcgtacgcgatgtccaatggctatgcgtatttgtgagcaacaa
aaaccgcaatttcgagaaataacaccagagcactttgttgcctgccatctttattcataa
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