Virgibacillus dokdonensis: A21D_01267
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Entry
A21D_01267 CDS
T05261
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpn03016
]
A21D_01267 (truA)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A21D_01267 (truA)
Transfer RNA biogenesis [BR:
vpn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A21D_01267 (truA)
Prokaryotic type
A21D_01267 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AUJ24366
UniProt:
A0A2K9IX71
LinkDB
All DBs
Position
complement(1357027..1357767)
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AA seq
246 aa
AA seq
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MERLKCTLQYDGSHFSGFQIQPGKRTVQGILEKALQKMHKGEPVRIHPSGRTDTGVHAKG
QTIHFDSPYNIPMYNWKQALNTLLPDDIYVKQVEVVPNTFHARYDVVEKEYRYYVYHAKE
PDVFRRNYAYFFPYALDVASMQVACRYLEGTHDFTTFSSAKATTRGSKQRTLYQVTCEKR
GAEIEFIFRGRGFLYNMVRIIVGVILDIGQGRREASDIAVLLSKRDRRSVGETVPAQGLY
LCRVKY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaacgactaaaatgtacacttcaatatgacggctctcatttctcgggctttcaaatc
caaccaggaaaaagaaccgtacaaggaatactagaaaaagcattacaaaaaatgcataag
ggtgaacctgtacgcattcatccttcagggagaaccgatacaggcgttcatgcaaaagga
cagacgattcactttgattctccatacaacatccctatgtacaattggaagcaagcatta
aacaccttgctccctgatgacatttatgttaagcaggtagaagtggttcctaatacgttt
cacgctaggtatgatgtagtagagaaggaatatcgctattatgtatatcatgcaaaggaa
ccggatgtatttagacgcaattatgcttattttttcccgtatgcattagacgttgcttcc
atgcaagtagcatgccgttatttggaaggaacgcatgattttacaaccttttcctctgct
aaagcaacaacaagagggagtaaacagcgtacgctttatcaagtaacctgtgaaaaaaga
ggcgccgaaattgaatttatttttcgtggtagaggatttttatataatatggtgcgcatc
atcgttggtgtaatattagacataggtcaaggaaggcgagaagcgtctgatatagctgtt
ttactgtcaaaaagggatagacgttcagtaggagaaacagtgcctgcacaaggcctctat
ttgtgtcgtgtgaagtactaa
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