Vanderwaltozyma polyspora: Kpol_1032p7
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Entry
Kpol_1032p7 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Kpol_1032p7
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpo03400
]
Kpol_1032p7
Enzymes [BR:
vpo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Kpol_1032p7
DNA repair and recombination proteins [BR:
vpo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Kpol_1032p7
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
5546698
NCBI-ProteinID:
XP_001646273
UniProt:
A7TGW3
LinkDB
All DBs
AA seq
965 aa
AA seq
DB search
MRNPTPILVSTNTNTNATFTSKADTNDIEEPHNFSPSPDFKWLCDELFVKLDQIQFRPKE
LNGSKPKYIEYYDIINNFIDIWRRTVGNDIYPALILTIPYRDRRMYNIKESKLIRIVCDY
LKLPKNSETERRLMRWKHRADRNVRLSTFCVEEIKKRKGEPREKIKITIDKLNECLDNLV
LERGYKGSKSQKISESETFKFCFENMTYVELKYFFDILLKDKIVGGLEHKFLNCWHPDAQ
DYLSVVSDLKIVSSKLWNPEFRLKYDDLTINIDHAFTPETAKRLTYSYDTIARRLKNDFF
IEEKMDGERIQLHYMNYGAKLKFLSRRGLDYSYLYGDNRNNGAIGRYLNFHKDVKECILD
GEMVTYDSVKNCILPFGLVKSSAMQSLSVSDIEPDGYHPLYMAFDLVYLNGSSLSTLPLH
QRKNYLDKLLIPCPDFVEILPALHCNDSSLIKSSLEKAIELGSEGIILKRFDSQYLVAKR
SDDWIKIKPEYLEQFGENMDLIVIGRDPGKKDSLMCGLILTGDNEPEEITSLDSNPTDTA
ESFLKPDKRKIISFCNIANGISQKEFRDIDRYTFGHWIKFDDELPPQDLFEFGTKHPIEW
IYPEHSVVLEIKARSLETNESARIKYGTGSTLFGGYCRQIRYDKDWVSCFTYNEFMESRN
LKNALVNYPDNKNLIGRKKRPKKRMFNSLTEIFENTKDAPDESNVIFRGLHFYVISDYID
ETDGSRLSKSDLCNLVLEHNGKLVHNPISRIDILNRLRIISMKYTRETTSLIERGYDIIH
PQWILDCISNRKLVRLLPSHCFNVSSSLMEVTKTRVDRYGDSYETSLTEKDFEILINRQV
LKSESADKRITEGENHLKIPILLFCNRRFFIPETLPSTPIYELKSKVELYGGKLVNKISD
CNVIVFTNTHTENRKEVMKKIRRALVCLDPNSMQVPVLPRIVDANWIDACISECVQVPEE
DYPAV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatccaactccaattcttgtcagtaccaataccaacaccaatgccacttttact
tcaaaagctgatactaatgatatagaagaacctcataatttttcaccttcaccagacttc
aaatggttatgcgatgagttatttgtaaagttagatcaaatacagtttcgaccaaaggaa
ctgaatggttcaaaacccaaatatatcgaatattatgatattattaacaatttcattgat
atatggagaagaacagtcggaaatgatatatatccagcactaattttaacaattccatat
agagatagacgaatgtataatatcaaagaatccaagctaataagaattgtttgtgattat
ttgaaattgccaaagaattccgaaacagaaagaagattaatgaggtggaaacatagagct
gatagaaatgtaagattatctacattctgtgtggaagagattaaaaagaggaaaggtgag
ccaagagagaagattaaaataacaatcgataaattaaacgaatgtcttgacaatttggtt
ctcgaaagaggttataaaggttcaaagtcacaaaagatttcagagtcagaaactttcaaa
ttttgctttgaaaatatgacttatgttgaattaaaatatttttttgatatattattgaaa
gataaaatagtaggcggtctagaacacaaatttctaaattgttggcatcctgatgcccag
gattacttaagtgtcgtgtctgatcttaaaatagtctcttcaaaattatggaatcctgaa
tttcgattgaagtatgatgacttgactataaatatcgatcatgcttttacacctgaaaca
gcaaagagactaacatattcatatgataccattgcaagaagattaaaaaatgattttttt
attgaagaaaaaatggatggagaaagaattcaattgcactacatgaactatggagcaaaa
ttgaaatttcttagtagaagaggtttggattatagttacctatatggggataacagaaat
aatggtgccattgggagatacttaaactttcataaagatgtcaaggaatgcatccttgat
ggtgaaatggtaacttacgattctgtaaaaaattgtattcttccattcggtttagttaaa
agtagtgcaatgcagtcactttctgtttccgatatcgaaccggatgggtaccatccattg
tatatggcatttgatttggtatatctaaatggttcttctctttcaacacttccgcttcat
caaaggaaaaactatcttgataaactattaataccctgtcctgattttgtagaaatcctt
ccagctctacattgtaatgacagttcactgatcaaatcatccctggaaaaagcgattgag
ctaggatctgagggaataatcttaaagcgctttgattcacaatatttagttgcaaagaga
agtgacgattggattaagattaaaccagaatatctagaacaatttggagaaaatatggat
ttaatagtgataggtagagatccagggaaaaaggattcccttatgtgtggcctaatactt
actggcgataatgagccagaagagatcaccagcttagattctaatccaactgataccgca
gaatcttttttgaaacctgataaaagaaagattatttcattctgcaatattgccaatggc
atatctcaaaaagaatttagagatatcgacagatatacatttggtcattggataaagttt
gatgatgaactacctccacaagacctctttgagtttggaaccaagcatccgatagaatgg
atatatccggagcattcggtagttcttgagatcaaggcgcgttcattagagacaaatgaa
tcggcaagaataaaatacggtactggtagcaccttatttggagggtactgccgacagatt
agatacgataaggactgggtttcttgtttcacttataacgagtttatggaatcaagaaat
cttaaaaatgcgcttgtaaattatcctgataataagaatctaattggaaggaaaaaacgt
ccaaaaaaacgtatgtttaattcccttactgagatttttgagaatacgaaagatgcgcca
gatgaatcaaatgttatttttaggggacttcatttttatgtaatatctgactatattgat
gaaactgacggttctagactatcaaaaagtgacttatgcaatttagtattagagcataat
ggaaaattagtgcacaatccaatatccagaattgacattcttaatagactgaggataata
tcaatgaagtatactagagaaactacgtcattaatagagagaggatatgatattattcac
cctcaatggattttagattgtatctccaacagaaaattggtacggcttctaccatcacat
tgttttaatgtatcatcgtccttaatggaagttacgaaaactagggtagatagatatggc
gatagctatgaaacctccttaacagaaaaagattttgaaattttaattaataggcaggta
ttgaaaagtgaaagtgcagacaagcgcattactgaaggtgaaaaccatttgaaaattcca
attttacttttctgtaataggcgattttttattccagaaaccttaccttcaactcccata
tatgagcttaaatcaaaagttgaactttatggggggaaacttgtcaataagatatctgac
tgtaatgtaatagtatttacaaacacacacactgaaaataggaaagaggttatgaagaaa
attaggagggccttggtttgcttagatcctaattcgatgcaagtccctgtgttgcccaga
attgtggacgcaaattggatcgatgcctgtatttcagaatgtgttcaagttcccgaagaa
gattatcctgctgtataa
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