Vespula pensylvanica (western yellowjacket): 122629176
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Entry
122629176 CDS
T07720
Name
(RefSeq) agrin-like isoform X1
KO
K06254
agrin
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04512
ECM-receptor interaction
vps04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122629176
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122629176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vps00535
]
122629176
Proteoglycans [BR:
vps00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122629176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
CFAI_KAZAL
Laminin_EGF
EGF
hEGF
EB
EGF_2
Motif
Other DBs
NCBI-GeneID:
122629176
NCBI-ProteinID:
XP_043668220
LinkDB
All DBs
Position
5:complement(51536..287076)
Genome browser
AA seq
2334 aa
AA seq
DB search
MRRTSSNGLKLDLTENTPGSSLSRLPNLVEHAESCQALSTGTGENLSSKLPNVVEGSMDY
GSERRSSRYLEYQDSKSYQDGQAASSVAGGTYDHVDYHEQLRAYRNCERKTGPSYGRENV
DRYEDNRIYPEDGPRYDRRGAAVEDRTYEESDLDGSYERSDAQKLSTRAYPTELQDASRR
YSRDLTDYEYASRYAEETLKLEPKKDHHHHHHHHHHSGKIYEAPVGASKGYESGVKTHDS
AYELGSCAGQQQQQQQQQQQDPGSTGRKYESKYHSAGKMYGTLPRYDTAGKSSSYEAGYE
PRSFESKYEEQAYETGSKAFDPKYELTSSKSYERCKYDGSSSGRYRDKSYEQTLKIGELG
SSSSAGPYARKQNQEHEDVAAEKMNGYRKNTFEAYGVYSDPEDDHGFLAEKKAPQYTYKG
VVVNASGESSVVEKRAKDNRQTEMPRSPWCRPMILLLLLVLLVVIFVFVAGILLYFNYMS
YKPRHPVIEGKDLNFASNNAEPCEKTYCAWGATCVVSENGKALCQCPTNCPSNSAQVCGS
DDVTYTNQCHLRQASCQRRKNTRIKHEGACEIKDPCSKLNCSQGAQCVRSRDGTEASCEC
LQTCPNLGDHEGSGPVCGTDGIDYPTLCDLNKGACAKGANISVAFRGKCDPCGSVECMEP
EICQLDGSRQPACRCGEQCGLEFSPVCGSDGKTYSNECSLRQEACRSRLPLRKIYNGACS
SGINPCDEAKCGSYEQCAINRYGIASCECGPECEPVMRPVCARGGTTYTSLCELKRRACL
TKSNIEVAYTGTCGSRGPCSEKVCQWGAICAENGGTAICECPTCPAEFQPVCGDDGISYG
NECKLRLEACQHRREIRVLYQGLCNGCENKKCEHYAECESDSAGEAKCVCPTKCENSGKE
PTDKVCGSDGVTYENECALKKVSCTTQTEIVIHYMGDCELCARVECENGGRCMAGVCVCP
EICPESNGEPVCGSDAKTYQSECELQKAACGRDPKLPALHVIFYGDCGERFAVAALTTMS
TPALTRVATTVADVTSTQEREACKDIHCDFEATCELGPDKFPRCSCRFDCASISPENMRP
VCGSDLRTYSSLCAMKMEACQRQQELRLRPLDLCQGMEVKPCNGDPPLIDADGKEYDCGS
GPDRRDCPSNSYCHQTPRFARCCKKVQGIQVVKCSDSWHGCCPDGKTAALGPDGAGCPSS
CNCNRLGSVSDTCNPETGQCECRPGVGGLKCDRCMPGYWGLPKISEGHQGCIPCGCSLFG
SVREDCEQMTGRCVCKPDIQGQKCTICTDHNKILTPTGCYSADTIPPIPTSCKELECYSG
GHCSEIGGPHCVCPSSCPTDIPLVPVCGSDGQTYDSECELRLYACRHQADVVTQAFGHCR
DDPLVNTDFPVKRYTAVQYTQPAAAISPLSKSTRHLLVPEPDPRYYYTHRAHQETITIDR
DNLKHGIAAAYRPTPATIRVVTALLGDLCTDDKDCTIPNSECSNGGCICSEGYAETSDRQ
ECFANYVPVTPTEEFRACLSYPCHMTSTCIDLPSATFVCICRPNYTGLLCDEEINKRDYE
VPSFDGKSYVRMSRLKAYHKFSIEVELKTYADNGIILYNQQKSDGTGDFVSLAIVDGHVQ
FRYNLGNGPVILTSPEKVTMKTFHRVAAKRYHKDGVLIFNDGEDIVGQSQGVLKSLDLNQ
DTFVGNMPSNYSKVYDNIGTNHGFLGCIRKLKINRIFVDLHVGRDKDVLETYRVKECGDN
ACANLPCENGATCQPIYEEDLCNGRECRRLQKRGKNRINKNARKNGVSIVRCKGSHCASI
DQPRSKKNSKKRCVGTKCDYDYDLDYEGSFERGNYAVEKYEPPDYKCICPPQFTGRNCEE
SLDPCIDEPCQHGATCDILPQGGYVCKCPPGRTGVHCEILDAELTELLIPEMSGDGFLEL
PCLEGVAKAFSIELWFLTLVNDGLLLYNGQLNNGRGDFISLNLVHGRLEFRFNLGSGIAN
ITSPDIVTLDSWHCVRISRLGREGVLQLDDGTVARGLSGSPLTELNLETPLYVGGVKHWR
EVHRLAGAWTGLTGAVQRLMVNGKTYQNLAVNVTQHNTEIYDGLPCPSNENPCHNGGVCL
PLLNSYLCKCASGYNGLHCEFFMGYDVSGTEISERPVRFDGDNFLQFKHRYGRSTNTTNT
TLGEYFEESYSDYDMEEDGEYEYDSYDYTERRGQQSNKFELRLRTIHPEGLIAWIGRGKL
EHLILSLRGGYVVLSYKSKTEQIMMKSRERVDDGVFHHIRASRRRRASTIQIDEFAPVKM
PMESGTLLTTNGKLFVGGKPGHRGIKGCVTDFIVDKRRLQLIRRKIDFCHDNDV
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggaccagcagcaatggcttaaagctcgatctaacggagaacacgccaggtagc
tcgttgtctaggttaccgaatttggtcgagcatgcggagagttgccaggccctgtccacc
ggcacgggagagaatttaagcagcaaattgccgaacgtggtcgagggctcgatggactat
ggtagcgaacgtaggtcctcccggtacttggagtatcaagattcgaagtcctaccaggat
ggtcaggccgcgtcgtcggtggccggcggtacgtacgatcacgtcgattatcacgaacaa
ctgagggcttacaggaactgcgagagaaagaccgggccgagctacggtagagaaaacgtc
gatagatacgaggacaatagaatatatccggaggacggtccgaggtacgatcgtcgagga
gcggcggtcgaggatagaacctacgaggaatcggatttggacgggtcttacgaaagaagc
gacgctcaaaagttgagcaccagagcttatcccacggagctgcaggacgcgagcagacga
tactcgagggacttgacggattacgagtacgcttcgagatacgccgaggaaacgttgaag
ctcgaaccgaagaaggatcatcatcatcatcaccatcaccatcatcactccggtaagatc
tacgaggccccggtgggtgcgtcgaagggttacgagtccggcgtcaagacccacgactcg
gcttacgagctcggcagctgcgccggacaacaacaacagcagcagcagcagcagcagcag
gatccggggtcgaccggtaggaagtatgagagcaagtatcattcggccggcaagatgtac
gggactttaccgaggtacgacaccgccggcaagtcctccagctacgaggccggttacgag
ccgagatcgttcgagtccaagtacgaggaacaagcgtacgagaccggtagcaaagctttc
gatcccaaatacgaattaacgagctcgaagagctacgagagatgcaagtacgacggctcc
tcttcgggcagataccgcgacaagtcctacgagcaaacgctcaagatcggcgagctcggt
tcgtcctcgtcggccggtccttacgcgagaaaacagaatcaagaacacgaagacgtcgcc
gcggagaagatgaacggttacaggaagaacacgttcgaggcgtacggggtttactcggat
ccggaggacgaccacggttttctagccgagaagaaagctcctcaatacacgtacaaaggg
gtagtcgttaacgccagcggggaatcgagcgtcgtcgagaagcgcgcgaaggacaacagg
caaacggaaatgccccgaagtccttggtgcaggcctatgatcttgctgctccttctggtc
ctcctcgtcgttattttcgtattcgtcgctggaatacttttgtatttcaattatatgtcc
tacaaaccacgccatcccgttatcgagggtaaggatctaaatttcgccagtaataacgcc
gaaccctgcgagaagacttattgcgcttggggcgcgacgtgcgtcgtatccgagaacgga
aaagctttgtgccagtgtccaacgaattgtccgtcaaattccgcacaggtttgcggctcc
gacgacgtgacgtatacgaatcaatgtcatctgagacaggcgagctgccagagaaggaag
aatactagaataaaacacgagggtgcctgcgagatcaaagatccgtgcagcaagttgaac
tgctctcaaggtgcccaatgcgtgcgaagtcgcgacggtaccgaggcctcgtgcgagtgc
ctgcaaacgtgtccgaacttgggagatcacgagggctctggacccgtttgcggcacggac
ggcatcgactacccgaccttgtgcgacctgaacaaaggcgcttgtgcgaaaggcgcaaac
atcagcgtggcttttcgcggcaaatgcgatccctgtggtagcgtcgaatgcatggaacca
gaaatctgtcagttggatggctccaggcaacccgcttgccgttgcggggaacagtgcgga
ctcgaattttcgcccgtatgcggaagcgacggtaagacttactcgaacgagtgcagtctc
cgacaagaagcttgcagatcgagacttccacttcgaaagatctataatggtgcctgcagt
tcaggtatcaatccctgcgacgaggcgaaatgcggttcgtacgaacaatgtgccatcaac
cgatatggtattgcgagctgcgaatgcggtccggaatgcgagccagtcatgagaccagtt
tgtgcgcgcggtggcaccacctacacgtccctttgcgagctcaagagacgggcctgtcta
acgaagagcaatatcgaggtcgcttacacgggtacctgcggctcgagaggaccctgctcc
gaaaaggtctgccaatggggtgcaatttgtgcggaaaacggcggaaccgccatttgcgag
tgtcctacctgtccagcggagtttcagccagtttgcggggacgacggcatcagctacggg
aacgagtgcaagctgagattagaggcgtgccaacatcgccgagagattcgagttctttat
cagggcttgtgtaacggttgcgaaaataagaagtgcgaacattacgcagaatgcgagagc
gacagcgccggagaggcaaaatgcgtttgcccgacgaaatgcgaaaattcggggaaagag
ccgacggacaaagtttgcggatccgacggtgtgacctacgagaacgagtgcgccttgaag
aaggtttcctgcacgactcagactgaaatcgtcatccattatatgggcgattgtgaactt
tgcgcgagggtggaatgcgaaaacggaggccgctgtatggcaggggtctgcgtatgcccg
gagatctgtccggaaagtaacggagagcctgtatgcggtagcgacgccaagacttaccaa
tccgagtgtgaattacaaaaggcagcttgtgggagggacccgaaattgccggccctgcac
gtgattttctacggcgactgcggtgaaagattcgctgtggcagcgctgacgacgatgtcg
accccggctctgacacgcgtggccaccacggtcgccgacgttaccagcactcaagaacga
gaggcttgcaaggacattcattgcgatttcgaggccacgtgcgaactcggaccggataaa
tttccaagatgtagctgccgattcgattgtgcctcgatatcgccggaaaatatgcgtccg
gtttgcggcagcgatcttaggacatattcgtctctctgcgcgatgaagatggaggcctgt
cagcgacaacaggagttacgactgaggccccttgatctttgtcaaggcatggaggtaaaa
ccttgcaacggagatccaccgttgatagacgccgatggcaaggagtacgactgtggaagc
ggacccgatcgcagagattgtccgagcaatagctattgccatcaaactccacgattcgct
cgctgttgcaagaaagtccaaggaattcaagtggtcaagtgctcggattcctggcacggc
tgctgtccggacggtaaaaccgcagcgcttggaccggatggcgctggttgtcccagttcg
tgcaattgtaacagactgggtagcgtatccgacacctgcaatccggaaaccggacagtgc
gaatgtcgaccaggagtgggtggtctcaagtgcgacagatgcatgccaggttactgggga
ttgccaaagatcagcgagggacatcaaggatgtataccctgcggttgttcgctctttggt
tcggtccgggaggattgcgagcaaatgaccggacgttgcgtctgtaagcccgacattcaa
gggcaaaagtgtacgatctgcaccgatcacaataaaatactcacgcctaccggctgttat
tcagccgatacgataccgccgattccaacctcttgcaaggaactggagtgctattccgga
ggacattgctccgaaataggcggtccacactgcgtctgtccgtcctcctgtccaacggac
ataccgttggtaccggtttgcggtagcgacggacagacctacgacagcgagtgcgaacta
cgtctctacgcgtgtcgtcaccaggcggacgtggtgacccaggcctttggtcactgcaga
gacgatcctctcgtgaacacggacttccccgttaagagatacaccgccgtgcaatacact
caaccagcagccgctatttcaccattatctaaatctaccaggcaccttttggtcccagaa
ccagatccacgatactattacactcatcgagctcatcaagaaaccatcaccatcgacaga
gataaccttaagcacggaatcgctgcggcatatcggccgacgcccgctactattagagtc
gtcacggcgcttctcggtgatctttgcaccgacgataaggactgcacgattcccaatagc
gaatgttccaacggaggttgcatctgttccgagggttacgcggaaaccagcgatcgacaa
gaatgtttcgccaattacgtgccagtaacaccgacggaggaatttcgtgcctgtctctcc
tatccttgccacatgacatcaacgtgcatcgacctgccgagcgcaacattcgtctgcatc
tgtcggccgaattacacggggctgctgtgcgacgaagagataaacaagagagattacgag
gtaccttccttcgacggtaagagctacgtcagaatgagcaggctgaaggcctatcataag
ttcagcatcgaggtcgaattaaagacctacgccgacaacggaatcatactttacaatcag
cagaagagcgacgggaccggcgatttcgtttctctcgctatcgtcgacggacacgtacaa
tttagatacaatctcggtaacggtccggttatcctcacttcgccggaaaaagtcaccatg
aagaccttccatagagtagcggcgaaaaggtatcacaaggacggagtactgatcttcaac
gatggcgaggatatcgttggccagagccaaggggtgctaaagtccttggatctgaaccag
gataccttcgttgggaatatgcccagcaattattcaaaagtctacgacaatatcggcacc
aaccacggttttctgggatgcatacggaagctgaagatcaatcgaatattcgtcgacctg
cacgttggacgagataaagacgttttggagacttatcgcgttaaggaatgcggagacaac
gcgtgcgccaatcttccctgtgaaaacggagcgacttgtcaaccgatctacgaggaggat
ctctgcaatggtcgggaatgtcgaagattgcaaaagaggggtaagaatagaattaataag
aacgctcgcaagaacggcgtaagcatcgtcaggtgtaagggttcgcattgcgcctcgatc
gatcagccaagatcgaagaagaattcgaaaaaacgttgcgttggtacaaagtgcgattac
gactacgatctcgattacgaggggagtttcgagcgtggcaattacgcggtcgaaaagtac
gagccaccggattacaagtgcatttgcccgcctcaattcaccggccggaattgcgaggaa
tccttggatccttgtatcgacgagccctgccaacacggtgccacttgcgacatactgccc
cagggtggatacgtttgcaaatgtccacccggaaggaccggcgttcattgcgaaattctg
gacgcggaattaacggaactgttaataccagagatgtccggcgacggttttctcgaattg
ccatgcctcgaaggtgtcgccaaagccttttccatcgaactatggttcctcactctcgtc
aacgacggccttctgctatacaacggccaactgaacaacggaagaggcgactttatcagt
ttgaacttggtccacggtagactagagttcaggttcaatctcggaagcggtatcgccaat
atcacgtccccggatatcgttactttggatagctggcattgcgtcaggataagcaggctc
ggaagggagggcgttcttcagttggacgacggaacggtggcgagaggactctctggaagt
cctctgacggagttgaatctggaaacgcctttgtacgtcggtggagtcaaacattggaga
gaagtacatcgcttggcgggagcttggaccggattaacgggagccgttcaaaggctgatg
gttaacggcaagacttatcaaaatcttgccgtaaacgtgacgcaacacaataccgagatc
tacgacggtttaccttgtccgagcaacgagaatccttgtcacaacggtggcgtttgcctt
ccgctcttaaacagttacctctgcaagtgtgccagcggctacaacggactgcactgcgag
tttttcatggggtacgacgtttccggcacagaaatttccgagagaccggtacgattcgac
ggcgacaacttcttgcaatttaagcatcgttacggtagaagtactaacacgactaatact
accctcggagagtatttcgaggagtcctattccgactacgacatggaggaggacggagag
tacgagtacgacagttacgattatacggaacgcagaggacaacaatcgaacaagtttgag
ttgcgactgagaacgattcatccggagggcctgatcgcttggatcggaaggggaaaactc
gaacaccttatactttccttgcgcggaggatacgtcgttctttcttacaagagtaaaacg
gaacagataatgatgaagagtagggagagagtcgacgacggtgttttccatcacataaga
gcgagtcgaagaaggcgcgcctcgacgatacaaatcgacgaatttgcaccggtgaagatg
ccaatggaaagcggaaccttacttacgaccaacgggaaactattcgttggtggtaaacca
gggcatcgaggtatcaagggctgcgtcacggactttatagtcgacaagcgtcgattgcaa
ctgatcagacggaagatcgacttttgtcacgacaacgacgtatga
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integrated database retrieval system
