Vigna radiata (mung bean): 106757946
Help
Entry
106757946 CDS
T04126
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106757946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106757946
04121 Ubiquitin system [BR:
vra04121
]
106757946
03036 Chromosome and associated proteins [BR:
vra03036
]
106757946
03400 DNA repair and recombination proteins [BR:
vra03400
]
106757946
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106757946
Ubiquitin system [BR:
vra04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
106757946
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106757946
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106757946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_6
zf-RING_5
zf-C3HC4_2
PTCB-BRCT
zf-RING_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
106757946
NCBI-ProteinID:
XP_014496295
UniProt:
A0A1S3TR96
LinkDB
All DBs
Position
3:2400664..2405418
Genome browser
AA seq
660 aa
AA seq
DB search
MDDSTKPNAGKPKLLNPWMLHFQKLALELKCPLCLSLFKKPVLLPCNHLFCDSCLADCVT
AGAGSECAACNAKYPQTDVRHVPFVENVVAIYKSLEATFCASLFHKHSSGDERVLEPCQA
ILNSTSSSIQAGKLPLNLPNLNKVGVVKNLKSKIAVHDKAEELELSHGRGKPNLMQSSQM
EMDVNQVTQSAPDSPPFCDTKGSDNDCSDQDSEHPLPDRLGNSSLKRASTGNGNLNEKMG
QLRSESSASETEGLERDPKRQKVQPTDAPNDFTPTGSICSFCQSSKTSEATGPMLHYANG
NLVTGDAAIKPNVIPVHRVCIDWAPQVYFVDEVVKNLKAELARGAKLKCSKCNLKGAALG
CYVKSCRRTYHVPCALDIPTCRWDHEDFLLLCPFHSNVKFPCEKSRSKKQAVRKHPNLPH
LPSHHSNTLEASQDEGKNMVFCGSALSNEEKVLLLNYASKVGATVTKFWTSNVTHVIAST
DANGACSRTLKVLMAILNGQWVLKLDWIKACMEEKNPVEEEPYEISVDNQGCQGGPRAGR
LKALANEPKLFSGLKFYFSGDYVSTYKEDLEELIEVGGGTVLRSKEELEAQRHECKVNSP
KFLVVYNLDPPQGCKLGEEVSILWQRLNDAEDLAANTLQVIGHTWILESIAACKLQPFVN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgattccacaaaacctaacgcaggcaaacccaaacttctcaatccatggatgctt
cacttccagaaactcgctcttgaactcaagtgtcctctctgtttgagtttgttcaagaag
cctgtgttacttccttgcaaccaccttttctgcgattcatgcttagctgattgtgtaaca
gctggggctggttctgaatgtgctgcttgtaatgcaaagtaccctcaaacagatgtaaga
cacgtgccttttgtggaaaatgtggtagcaatatataaaagcttggaggccaccttttgt
gcaagtttgtttcataaacattcttctggtgatgagagggttttggagccatgccaggca
attcttaattcaacttctagcagtatacaagctggcaagcttcctctgaatttgcctaat
ttgaacaaggttggggttgtcaagaatctcaaatccaagattgcagtgcatgataaagct
gaggagcttgagttgtctcatggaagagggaagcctaatctgatgcaatcttcccagatg
gaaatggatgtgaatcaagtgacacaatcagccccagatagccctcctttttgtgatacc
aaaggttcagataatgactgcagcgatcaagacagtgagcatccactacctgatagattg
ggaaactcttccttaaagagagctagtacaggaaatggaaatttgaatgagaaaatggga
caactaaggtcagaaagttcagcctcggaaactgagggtcttgaaagggatcccaaaaga
cagaaagttcagcctacagatgctccaaatgactttactccaactggaagtatctgttca
ttttgccaatcttccaaaacctctgaggctactggaccaatgctgcattatgctaatgga
aacttagttactggagatgcagcaattaagccaaatgttatacctgtgcatagagtttgc
attgactgggcaccacaagtgtactttgttgatgaagtggttaagaatctcaaggcggaa
ttggcaaggggagcaaaacttaaatgcagtaaatgtaatctaaagggagccgctcttggt
tgctatgtcaaatcatgcagaagaacttatcatgttccttgtgcacttgacatcccaaca
tgtcgttgggatcatgaggattttcttttgctctgccccttccattcaaacgtcaaattt
ccatgtgagaaatccaggtctaagaagcaggcagtgcggaagcatcccaatttgcctcat
ttgccatcacaccactcaaatactcttgaagcttcacaggatgagggtaaaaatatggtt
ttctgtggatctgctttatcaaatgaggaaaaggtacttttgctcaattatgcaagtaag
gttggtgcaacagtgacgaaattctggacctcaaatgttacacatgtaatagcgtcaact
gatgctaatggagcatgctccaggacattgaaagttctcatggctattctaaatggacaa
tgggtactaaaactagattggataaaagcatgcatggaagagaaaaatcccgtagaagaa
gaaccttatgaaattagtgttgacaaccaagggtgtcaaggtggcccaagagcgggcaga
cttaaggcattggccaatgagccaaagctattcagtggcttaaagttttatttttctggg
gattatgtgtcaacttataaggaagatcttgaagagttaattgaagtgggtggaggtact
gttttgagaagcaaggaagaattagaagctcaaagacatgaatgcaaagtgaattctcca
aagtttcttgttgtttacaaccttgatcccccacaaggatgcaagttaggggaagaagta
tcaattctctggcaaagactcaacgatgcagaggacttagctgccaatactttacaagtg
attggtcacacatggattcttgaatcaattgctgcatgtaaattgcagccttttgttaac
taa
DBGET
integrated database retrieval system
