Vigna radiata (mung bean): 106776217
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Entry
106776217 CDS
T04126
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106776217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106776217
04121 Ubiquitin system [BR:
vra04121
]
106776217
03036 Chromosome and associated proteins [BR:
vra03036
]
106776217
03400 DNA repair and recombination proteins [BR:
vra03400
]
106776217
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106776217
Ubiquitin system [BR:
vra04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
106776217
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106776217
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106776217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT_2
BRCT
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
zf-RING_6
zf-P11
SAS4
RTT107_BRCT_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
106776217
NCBI-ProteinID:
XP_014519084
UniProt:
A0A1S3VLX3
LinkDB
All DBs
Position
10:16705582..16711354
Genome browser
AA seq
1122 aa
AA seq
DB search
MSSVVHASVIAMGDLERMGRELKCPICWSLFDSAVSLTCNHHFCNSCIVKSMKSASACPV
CKIPFTRREVRPAPHMDNLVNIYKNMEVASGINIFVTQNVSQANLSDVEKQCDGNADFGK
VEAGGSHKGHVQEKKTRKKKKAKKIVQVNMESSGSGLPKPSFPAKKRVLVPQNILSETPM
KNLKLGDCVSEINKEKGVENVPLIGSEMPLQSEKSVPVLSPFFWLREEKDGEKSSQPTDE
DQFIDGSTPNPPSFSDLRDSDDENTSNVAPFDERQNQISVNLFDSEMFEWTQRPCSPELF
SSPSKMQLQVMDTYEDDEDQDELVAASQELDANLPSTDADNIKFENPKGNKTADALPPNV
SPLIRSSVDINGQIKSRKRGRKAREKIRHEQIVEPKNSIDGMHVDGHVSLEVTQERAMDH
KPKSCNLGKASRRGKKVCFNTSSVPTSTSACTVPDTSGVLSIDEMEMVAISCISPSKQEN
GKHCPLEIAGKSQKIISGKQIKSRKRGRKARAKIRHEQIVEPKNSIDGMHVDGHVSLEVT
QERALDDKPKSCNMGTASRRGKKVCFNTSSVPTSSSACTVPDSSGVLSIDEMEMVANSCI
SPSKQENGKHCPLEIAGKSQKIISGKQHMDPTEEFAGSDSSLFSLQTNSNVNTSKCKQSK
NIFTRKSISGSKKLRNTERSKLSSECTSITKKAEEILRNESVHHCPHVSDMNDTSKEKHR
SLTDKTVLRKCESYVKKYQCFFCLSSEESEVSGPMVHYLDGKPVPADYEGGFKVTHCHRN
CTEWAPNVYFDGENAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCAKWTS
LCRWDTQNFVMLCPLHESSTLPCEDSGSQKRSKKGQGRDGKNHGPSLDTITQTRADHRSY
KKIVLCCSALSVQEKDIVSKFESVSKVTVVKNWDSSVTHVIASTDENGACRRTLKVLLGI
LEGKWILNVEWIKACMKEMNPVCEERYEINVDIHGIRDGPRLGRLRVLNTQPKLFYGYKF
YFMGDFIPSYKVYLQQLVVAAGGIILHRKPVSCDQNLMLSDTHSYQNFIVYSLELPDKCK
PSEMDTICRQRCHDAEVVASSTGSKVVTNTWILNSIAACKLQ
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgttgttcatgctagtgttatcgcaatgggagatttagagagaatgggcaga
gaactcaaatgcccaatctgttggagtttgttcgattctgcggtttcgcttacctgcaat
catcacttctgcaactcgtgtattgtaaagtccatgaaatcggcctctgcttgtcctgta
tgtaaaattccgttcactcgtcgagaggttcgccctgctcctcatatggacaacttggtc
aatatatataagaacatggaagttgcttcaggaattaatatatttgttacccagaatgta
tctcaagctaatttatcggatgtggaaaaacaatgtgatggtaatgccgactttggcaaa
gtggaagctggtggatctcacaaaggtcatgtgcaagagaagaaaacccggaagaaaaag
aaggcgaagaagatagtccaggtcaacatggaaagttcaggctctggcctaccaaaacct
tcttttccagccaagaaaagggtgctggtgccacaaaatattctttcagagactccaatg
aaaaatttgaagcttggagattgtgttagtgaaattaacaaagagaaaggagtggaaaat
gttcctctcattggaagtgaaatgcctctacaaagtgaaaaatctgttcctgttctttca
cctttcttttggttgagagaggaaaaagatggtgaaaagtcgagccaaccaactgacgag
gatcaatttattgatggatcaacaccaaatcctccttcatttagtgacctcagggactcg
gatgatgaaaacacttctaatgtcgctccattcgatgagaggcaaaatcaaatctctgtt
aatttatttgatagtgagatgtttgaatggacacaaaggccttgctctccagaattattt
tcaagtccctctaaaatgcagctgcaggtcatggatacttacgaggatgatgaagatcaa
gatgaattggtggctgcctcacaggagctggacgcaaatctaccaagtactgatgctgac
aacataaaatttgagaatcccaaaggaaataaaacagctgatgcattaccaccaaatgtt
tctcctctaattagaagttctgttgatataaatggacaaataaagtctaggaaaagggga
aggaaggctagggaaaaaattaggcacgagcagattgtcgaaccaaaaaattcaattgat
ggaatgcatgttgatggacatgtatcactagaagtcactcaggaacgagcaatggaccac
aaacccaaatcttgtaatctggggaaggctagtagaaggggcaagaaggtttgtttcaat
accagttcagttccaacatctacaagtgcatgtacagtccctgatacgtcaggagtttta
agtattgatgaaatggagatggttgcaatttcatgtatttcgccatctaaacaagaaaat
gggaagcattgtcctctggagattgctggaaaaagccagaagataatatctggaaaacaa
ataaagtctaggaaaaggggaaggaaggctagggcaaaaattaggcatgagcagattgtc
gaaccaaaaaattcaattgatggaatgcatgttgatggacatgtatcattagaagtcact
caggaacgagcattggacgacaaaccgaaatcttgtaatatggggacggctagtagaagg
ggcaagaaggtttgtttcaataccagttcagttccaacatcttctagtgcatgtacagtc
cctgattcgtcaggagttttaagtattgatgaaatggagatggttgcaaattcatgtatt
tcgccatctaaacaagaaaatgggaagcattgtcctctggagattgctggaaaaagccag
aagataatatctggaaaacaacatatggacccaaccgaagagtttgccggttctgattca
tcccttttcagtctgcagacaaatagtaacgtgaatacctctaaatgcaagcaatccaaa
aacatatttactagaaaatctatatctggcagtaaaaagttgagaaatactgaaaggtca
aaactttcttctgaatgtacctctatcactaaaaaggctgaagaaattctacgtaatgaa
agtgttcatcactgtcctcatgtcagcgatatgaatgatacatcaaaagagaaacatcgt
tctttgactgataaaacagttttaaggaaatgtgagagctatgtcaagaagtatcagtgt
tttttctgtctctcatcagaagaatcagaggtttctggccctatggtgcattatcttgat
ggcaaacctgtacctgcagattatgaaggggggtttaaagtcacacattgtcacaggaac
tgcacagaatgggcccccaatgtatattttgacggtgaaaatgcaataaatcttgaagct
gagataagtagaagtcgaagaattaaatgtagtttttgtggacttaaaggggccgcactt
ggttgttatgagaaaagttgtcgcaggagctttcatgttccttgtgccaagtggacttct
ttatgtcgttgggatacgcaaaacttcgtcatgttatgtcctctacatgaatcctccacg
ttgccctgtgaagattcaggttcccaaaaaaggagcaagaaaggccaaggtagagatggc
aaaaaccatggtcctagtcttgacactataacccaaactcgggctgatcatagatcttac
aagaaaattgttctatgttgttctgctctatccgtacaggagaaggacattgtttccaaa
ttcgaaagtgtatctaaagttacagttgtgaaaaattgggactcgagtgtcacccatgtt
atagcatcaacggatgaaaacggggcatgcagaagaaccctgaaagtattgctgggtatc
ctggagggaaagtggattctaaatgttgagtggatcaaagcttgcatgaaggaaatgaat
cctgtttgtgaggagcgttatgaaattaatgttgacatccacggaattagggatggtcct
cgtctaggacgactaagagtattgaacacgcaaccaaagcttttttatggctacaagttt
tattttatgggagattttataccttcatacaaggtgtatctgcaacaacttgtggttgct
gctggagggataattctgcatagaaaaccagtgtcttgtgaccaaaacttaatgttatca
gatacacattcatatcagaacttcatagtttacagcctcgagctgccggataaatgtaag
ccttcagaaatggatacaatttgcagacaaaggtgtcatgatgcagaggttgtggcaagc
tctacaggctcaaaggttgtaactaatacatggattcttaattcaattgcagcctgcaaa
ctgcaatga
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