Vitis riparia (riverbank grape): 117905888
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Entry
117905888 CDS
T07274
Name
(RefSeq) disease resistance protein RPV1-like isoform X1
Organism
vri
Vitis riparia (riverbank grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
LRR_4
TIR_2
C-JID
LRR_8
LRR_1
AAA_16
LRR_3
AAA_22
AAA
ATPase_2
FliL
Motif
Other DBs
NCBI-GeneID:
117905888
NCBI-ProteinID:
XP_034674646
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Position
18:complement(29308278..29314312)
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AA seq
1101 aa
AA seq
DB search
MASSTQTPSSSSSTPIRKYNFDVFLSFRGEDSGYNFTDQLYENLLRSTTKTFRDDELEKG
EEIKSGILKTIEESKISIVVFSKNYAHSKWCLDEFAKIMECRKEMGQIVLPVFYHVDRPD
VHVQRGSFGEAFCIHKRDVDEKKVQRWRDALTKAAYLSSFHVPKDGNESTIIEKIIDFVN
RELKLPGHNLIGIDGRLEELKSLIGIGSYDVRMLGVWGLGGIGKTSIARVIYNSISYQFD
GASFLPSVCEQSMPRVQKELLSDITELSYEELNVDEGLNKIKEELQKKKILIIVDDVDCL
SQLKDLVPNRDCLGGGSRIIITTRDKHLLLEHGVDAIYEVQGLDFEESIRLFSLYAFKAR
FPKREYRGLSLNIVNYSEGLPLALKVLGGFLFGKSIYEWESILYKLKHQSLKEIQDVLQI
SYDRLDYKTKDIFLDIACFFKGEEREFVSRILDGAEKAITDLYNKSLLTFSNNKIMMHPL
LQQMGQGVVHQACPQEPGKQSRLWRSEDVHRILRQNEGTDAIEGIVLKISAAERIAFTTK
AFKMMNKLRLLKVCRDHKCGSMVHVSTDFEFPSYELRYLHWDGYPLESLPSNFHGEKLIE
LNLQNSELRGLWEGSKPLEKLKVINLSHSQQLIQIPDFSDTPNLESLILEGCTNLENIPS
SIWDLDSLVNLDLSRCSKLQELAEIPWNLYSLEYLNLAFCTNLESLPESLSNLKCLKTLN
VIGCSKLPDNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLDVHGTNLEQGAIGSD
IGSLYSLEELDLSYCNLTEGGIPDDICCLYSLRVLDLSGNHFLKVTDAISQLSKLRVLGL
RHCKSLLEIPELPSSLRVLDAHDCISLETLSSTSLLQWQRQLNCFKSARLQEIQELKYRR
LFSLPANGVSQGFNTVIPGGGEVPEWISHEGIGSEVTVKLPLNWYHKKDFLGFALCCVYI
PQQDEPVDESMDEPESSKSENAMVNITQPYRLGCELSFLDDEIGFLDYLFCGSSCQCDHN
DGVSESVWVTYYSNVAIKHKYRSHKSRHLKASFRGYVDGKPVKVKKCGIGLVHVDLNRTS
HAFQAQHSTDQLRLKLVSHVS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctacccaaacaccctcttcttcttcttctaccccaatccgtaaatataac
ttcgatgtgttcttgagttttagaggtgaagacagcggctacaattttacggatcagtta
tacgaaaatttgcttcggtcgacgactaaaactttcagagacgatgaacttgagaaagga
gaggagatcaaatcaggaattttgaaaactattgaagaatcaaaaatttccatagttgtg
ttctcaaaaaactatgcgcattccaagtggtgtttggatgagttcgcgaagatcatggag
tgcaggaaagaaatgggacaaatagtcttgccggtcttctaccacgtggaccgtcctgat
gtgcatgtgcaaagagggagcttcggagaggcattttgcattcataaaagagatgtagat
gagaaaaaggtgcaaaggtggagggatgccttgactaaagcagcctatctatctagtttc
catgtgcccaaggatgggaatgagtcaactattattgagaaaatcattgatttcgtcaat
cgcgaattgaaacttccaggtcataacttaattggaattgatggacgtttggaagaattg
aagtcattgataggcattggatcttatgatgttcgcatgcttggagtatggggattaggt
ggaattggtaaaacctcaattgcacgtgttatttataactcaatctcataccaattcgat
ggtgctagctttcttccaagtgtttgcgagcaatccatgcctagagtacaaaaagaactt
ctatctgacattacagaactatcctatgaagagctgaatgttgatgaagggctcaataag
ataaaggaggaattgcaaaaaaaaaaaattcttatcattgttgatgatgtggattgtttg
agtcaattaaaggatttagttccaaatcgagattgtcttggtgggggaagtagaattatt
ataacgactagagataaacatttactacttgagcatggagtggatgctatatatgaggtt
caaggattagattttgaagaatctatacgtctctttagtctttatgccttcaaagcaaga
tttcctaaacgagaatacagaggactttccctaaatatagtaaattatagtgagggcctt
ccattggctcttaaagttttaggtggttttctttttggtaagtcaatatatgaatgggaa
agtatattgtataaactaaaacaccaatccttgaaagaaattcaagatgtgcttcaaatc
agttatgatagactagattataaaacaaaagatatatttcttgatattgcatgttttttt
aaaggggaagaaagagaatttgtctcaagaatattagatggggctgagaaagcaataaca
gatctctataataagtctctcctaactttttcaaataataagataatgatgcacccttta
ttgcaacaaatgggtcaaggagttgttcatcaagcatgtcctcaagagccaggaaagcag
agcagattgtggagatcagaggatgtccatcgcatattgaggcaaaatgaagggactgat
gcgattgaagggatagttctaaaaatatctgcagcagaacgaatagcgtttaccactaaa
gctttcaaaatgatgaacaaacttagattactcaaagtttgtcgggatcataaatgtggt
tctatggtgcatgtttctacggactttgaatttccgtcttatgagttaagatatcttcat
tgggatggatatcctttggaatctttgccatcaaattttcatggagagaagcttattgaa
ctcaatctgcagaatagtgaactaagaggactttgggaagggagcaagcctcttgagaag
ttaaaggttatcaatctcagtcactctcagcagctcattcaaatcccagacttctcagat
acaccgaatctggagagtctaattcttgaagggtgcacaaaccttgagaacattccaagc
agcatctgggacttggattctcttgtaaatcttgatctctctcgctgttcaaaactccag
gaacttgcagagatcccgtggaatctatactcattggaatatttgaacttggcattctgc
acgaatcttgaaagccttccagagagcctttctaacttgaaatgtcttaagactctcaat
gtaatcgggtgttcaaaactgcccgacaacctgggaagcctggaatgtctagagaagctt
tatgcatcaagttcagaattgattagccctcaatcggattcctctttggctggtttgtgc
tccttaaaagtattggatgtgcatggcaccaacctagagcaaggagcgatcggtagtgac
attggcagcttatactcattggaagaattggacctaagttactgcaatttaacagaagga
ggaattcccgatgatatttgttgcctatactcattgagagtattagatctaagtggaaac
cattttcttaaagtaactgatgccataagtcaactttctaagctaagagtgcttgggttg
aggcactgcaagagtcttctagaaattccagagcttccatcaagtctcagagtcctagat
gcccatgattgcataagcctggaaactttatcaagtacatcattgttgcaatggcagagg
cagttaaattgcttcaaatctgctcgtttacaagaaattcaggagttgaaatacagaagg
cttttctctcttccagcaaatggtgtcagccagggatttaatactgttatccctggaggt
ggagaagttccagagtggatatcacacgagggtattggcagtgaagtaacagtaaagctt
cctcttaattggtaccacaagaaggacttcttgggattcgcattatgctgtgtttatatt
ccacaacaggatgaacctgtggatgaatcaatggatgaaccagagagtagtaagtctgag
aatgccatggtgaatatcacgcaaccttatcgcttaggatgtgaactgagtttccttgat
gatgaaattgggtttttggattatctcttctgtggatcatcctgccaatgcgaccataat
gatggtgtatcagagtcagtgtgggtaacgtattattctaatgttgctattaagcacaag
taccggtcccataaatcaaggcatttaaaggcgtcatttcgtggttatgttgatggtaag
ccagtgaaggtgaaaaagtgtgggattggtcttgtacatgttgatcttaataggacatcc
cacgcgtttcaggcacaacactcaactgatcaattgaggcttaagttggtttcccatgtc
agctga
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