Vitis riparia (riverbank grape): 117906571
Help
Entry
117906571 CDS
T07274
Name
(RefSeq) disease resistance protein RPV1-like isoform X1
Organism
vri
Vitis riparia (riverbank grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
TIR
LRR_1
NB-ARC
C-JID
TIR_2
ATPase_2
AAA_16
AAA
AAA_24
Motif
Other DBs
NCBI-GeneID:
117906571
NCBI-ProteinID:
XP_034675523
LinkDB
All DBs
Position
18:complement(37715845..37737045)
Genome browser
AA seq
1859 aa
AA seq
DB search
MASSSSLKASSSTSNCDGYNYHVFLSFRGEDTRQTFTGHLYANLVARGIHTFRDDEELEK
GGDIASDLSRAIKESKIFIIIFSKHFADSKWCLNELVKIIDCMTEKKVVLPVFYHVEPRD
VRNQKGSFEDAFSKHAEGADQEKKKTIETWKNALKTAANLSGYHLQNQSEAEFIKRICED
IVTKLNRTPLYMGDNIVGMDFHLKQLKSLIKVEIDEVLMVGIYGIGGIGKTTISKAIYND
ISSQFDGSSFLGNVGGKCENDLLKLQKTLLQDILKCERPKFNDINQGITVIKERLRSKRV
LIVLDDVDKYMQLENLAGKYGWYGAKSIIIITTKEKYLLEQYEVNVFYEVQKLNHEKSTE
LFNWWAFKQNTPKTGFESLSNSVVEYADGLPIALKVLGVSLFKKSTEEWESELQKLQEMP
NKDVQSVLKVSYDKLDGREKGVFLDIACFFRGKDKNFVSRILGSVAEAVIRNLEDRCLIT
ISENILDMHDLLQQMGRAVVRQEPGKMSRLWDPKDVESVLTRNTGTKAIEGLFVKVSTLN
QIQFPANFFAKMRSLRLLKVYDMIVGDLDDFVVDLPKDFEIPSFELRYLHFEGYPLQFLP
RNFHAKNLVELDLIGSSIKQLWKENEILDKLKVIDLSYSKDLVEIPNFSSVPNLEILILQ
GCTRLQSLPRNFHKLEHLRSLSCADCSELKSFPEIKGNMSKLRELNLSGTAIIEVPSSIG
RLKALQHLDLSYCKSLRSLSESICNLSSLETLILVGCSNLKGFPEIKDMENLKRLDLSFT
GIEELPSSIGHLKALKHLNLKCCTELVSLLDSICNLSSLKTLILEGCSNLKGFPEIKDMA
NLKRLDLGRTCIEELPSSIGRLKALQHLDLSYCKSLRSLSESICNLSSLETLILAGCSNL
KGFPEIKDDMENLKRLDLGETGIEELPSSIGRLKALQHLDLKCCTELVSLPDSICNLSSL
ETLILAGCSNLKGFPEIKYDMENLKRLDLDRTGIEELPSSIGCLKALQHLDLSYCKSLRS
LSESICNLSSLETLILAGCSNLKGFPEIKYDMENLKRLDLDRTGIEELPSSIGCLKALQH
LDLSYCKSLRSLSESICNLSSLETLILAGCSNLKGFPEIKDDMENLKRLDLTETGIEELP
FSIGRLKALQHLDLSFCKSLRSLLESICNLSSLETLILVGCSNLKGFPEIKYDMENLKRP
DLGRTGIEELPSSIGRLKALQHLDLSYCKSLRSLSESICNLSSLETLILASCSNLKGFPE
IKDMENLKRLDLRKTGIEELPSSIGHLKALKHLDLSWCQNLVNLPESICNLSSLKTLILA
GCSNLKGFPEIKDDMENLKRLDLGETGIEELPSSIGHLKALQHLDLSRCKSLRSLPESIC
NLSSLETLILERCSNLKGFPEIKDDMENLKRLDLGETGIEELPSSIGRLKALQHLDLKCC
TELVSLPDSICNLSSLKALDVQECPKLERVEVNLVGSLYLTCWILNQSVIWSSGGDQRVA
EVEGEVLNHHVSSLSSLVESCTRDYRDISGDSFHLSALQVLSVGNFSPIQRRILSDIFRQ
SSLASVSLRNCNLMEEGIPSGFWNLSSLVNLSLSNCSLTEGEILNRICHISSLQNLSLDG
NHFSSIPANIIQLSKLRSLCLNHCLKLLQIPELPPSLRVLDVQDCPCLETLSSPSSLLGL
SLFKCFESAIEDYDGRFYCQEKVEILMPGNNGIPEWISHKKKGSEIVVELPENWWEDNNF
LGFALCSVLEYEEIFEFYFEYYFELTFHHFYPDGNLSESKFRDRGVFSRRRCCNGGESNG
VLVAFYPKVAIKNKGWSNEWRHMKASFHGKREKVEECGLHLIYKKQRFQCHQPLASVIE
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagcagctccttgaaagcgtcgtcttccacttctaattgtgatggttataat
tatcatgtgttcttgagttttagaggtgaagacacccgccagactttcactggtcatctt
tatgctaatttggttgcacgtggaattcacaccttcagagatgatgaagaacttgagaaa
ggaggagatatcgcatcagatctctcgagagctatcaaagaatcaaagatttttattatt
attttctcaaaacactttgctgactccaagtggtgtttgaatgaactggtaaagatcatc
gattgtatgacagaaaagaaagtggttttgccggttttctaccatgtggagccaagagat
gtacgaaatcaaaaaggaagttttgaagatgcattttcgaagcatgcagaaggtgcagat
caagagaagaagaagacaatagaaacgtggaagaatgccttgaagacagcagccaaccta
tctggatatcatctgcaaaatcaatctgaggcagagtttattaaaaggatttgtgaagat
atcgttacaaaattgaatcgtacgcctttatatatgggcgacaacatagttggaatggac
tttcatttgaagcagttaaaatcacttataaaagttgaaatcgatgaggttctcatggtt
ggtatctatgggattggtggaattggcaaaactaccatctctaaggctatttataatgat
atctcgtctcaatttgatggtagtagctttcttggaaatgttggggggaaatgtgaaaat
gatctacttaaattacaaaagacacttcttcaagatatcttaaagtgtgaaaggccaaaa
ttcaatgatattaaccaaggaatcactgtgataaaggaaaggcttcgatcgaaaagagtc
cttattgttctcgatgatgtggacaagtacatgcaattagaaaacttggccggaaaatat
ggttggtatggtgcaaaaagtataatcatcataacaactaaagagaaatatttgttagaa
caatatgaagtaaatgtattttatgaagtacaaaaattgaatcatgaaaaatctactgag
cttttcaattggtgggccttcaagcaaaatactcccaaaactggatttgaaagcctttca
aatagtgtagtggagtatgctgatggccttccaatagcacttaaagttttgggtgtttct
ctctttaagaagtcaacagaggaatgggaaagtgaattgcagaaactacaagaaatgcct
aacaaagacgtccaaagtgtgcttaaagtaagttatgataaattggatggtagagaaaaa
ggggtattcttggatattgcatgtttttttagaggaaaagacaaaaattttgtttcaaga
atattaggaagtgttgcagaggctgtaataagaaatctggaagatagatgtctcattact
atttcagaaaacattttagatatgcatgatttattacaacaaatgggtcgggcagttgtt
cgtcaagagcctggaaaaatgagtagactttgggatcctaaagatgttgagagcgtgtta
acaagaaatacggggactaaagcaattgaaggactatttgtaaaagtttctacattaaac
caaatacaatttcctgcaaattttttcgcgaagatgagaagtcttagattgctcaaagtc
tatgatatgattgtgggtgatttggatgattttgtggtggaccttcccaaggattttgaa
attccttcctttgagttaagatatctccattttgagggataccctttacaattcttacca
aggaattttcatgcaaagaatcttgtagaacttgatttaatcggtagtagcataaaacaa
ctttggaaagagaatgagattcttgacaagttgaaagtcatcgaccttagttattcaaag
gatctcgttgaaatcccaaacttttcgagtgtaccaaatttggagattctaattctacaa
gggtgcacaagacttcagagtcttccaaggaattttcataaattggaacatcttcgaagt
ctctcttgtgcggactgttcagagctaaagagttttccggaaatcaagggaaatatgagc
aaactaagagagcttaatttaagtggaacggctattatagaagtaccatcctcaattgga
cgtctaaaggctcttcaacacctagatttgtcttattgcaaaagcctaagaagtctttcg
gagagcatttgcaatttgagctctcttgaaactctcatcttggtagggtgttcaaattta
aagggctttccagaaatcaaagatatggaaaatctaaaaaggcttgatttgagttttaca
ggtatagaagagcttccatcctcaattggacatctaaaggctcttaaacacttgaatttg
aaatgttgtacagagcttgtgagtcttctggatagcatttgcaatttgagctctcttaaa
actctcatcttggaggggtgttcaaatttaaagggctttccagaaatcaaagatatggca
aatctaaaaaggcttgatttgggtagaacatgtatagaagagcttccatcctcaattgga
cgtctaaaggctcttcaacacctagatttgtcttattgcaaaagcctaagaagtctttcg
gagagcatttgcaatttgagctctcttgaaactctcatcttggcggggtgttcaaattta
aagggctttccagaaatcaaagatgatatggaaaatctaaaaaggcttgatttgggggaa
acaggtatagaagagcttccatcctcaattggacgtctaaaggctcttcaacacctagat
ttgaaatgttgtacagagcttgtgagtcttccggatagcatttgcaatttgagctctctt
gaaactctcatcttggcagggtgttcaaatttaaagggctttccagaaatcaaatatgat
atggaaaatctaaaaaggcttgatttggatagaacaggtatagaagagcttccatcctca
attggatgtctaaaggctcttcaacacctagatttgtcttattgcaaaagcctaagaagt
ctttcggagagcatttgcaatttgagctctcttgaaactctcatcttggcagggtgttca
aatttaaagggctttccagaaatcaaatatgatatggaaaatctaaaaaggcttgatttg
gatagaacaggtatagaagagcttccatcctcaattggatgtctaaaggctcttcaacac
ctagatttgtcttattgcaaaagcctaagaagtctttcggagagcatttgcaatttgagc
tctcttgaaactctcatcttggcggggtgttcaaatttaaagggctttccagaaatcaaa
gatgatatggaaaatctaaaaaggcttgatttgacggaaacaggtatagaagagcttccc
ttctcaattggacgtctaaaggctcttcaacacctagatttgtctttttgcaaaagccta
agaagtcttttggagagcatttgcaatttgagctctcttgaaactctcatcttggtgggg
tgttcaaatttaaagggctttccagaaatcaaatatgatatggaaaatctaaaaaggcct
gatttgggtagaacaggtatagaagagcttccatcctcaattggtcgtctaaaggctctt
caacacctagatttgtcttattgcaaaagcctaagaagtctttcggagagcatttgcaat
ttgagctctcttgaaactctcatcttggcgagttgttcaaatttaaagggctttccagaa
atcaaagatatggaaaatctaaaaaggcttgatttgaggaaaacaggtatagaagagctt
ccatcctcaattggacatctaaaggctcttaaacaccttgatttgtcatggtgccaaaac
cttgtgaatcttccggagagcatttgcaatttgagctctcttaaaactctcatcttggcg
ggttgttcaaatttaaagggctttccagaaatcaaagatgatatggaaaatctaaaaagg
cttgatttgggggaaacaggtatagaagagcttccatcctcaattggacatctaaaggct
cttcaacacctagatttgtcaaggtgcaaaagcctaaggagtcttccggagagcatttgc
aatttgagctctcttgaaactctcatcttggagaggtgttcaaatttaaagggctttcca
gaaatcaaagatgatatggaaaatctaaaaaggcttgatttgggggaaacaggtatagaa
gagcttccatcctcaattggacgtctaaaggctcttcaacacctagatttgaaatgttgt
acagagcttgtgagtcttccggatagcatttgcaatttgagctctcttaaagcacttgat
gtccaggaatgtccaaaactggagagagtggaggtgaacctagtgggatctttgtatcta
acttgttggattctaaaccaaagtgtaatctggtcgagcggtggtgatcaacgggtcgcc
gaagtggaaggagaggtccttaaccatcatgtttcctccctgtcatcactggtagaatca
tgtacaagagactacagagacatctccggtgatagtttccacctatctgcactgcaagta
ttatccgtaggtaacttcagtccaattcaaagaagaatcctcagtgatattttccgccaa
tcttcattggcaagtgtatctcttcgtaactgcaatctaatggaagaaggaatccctagt
ggtttttggaacctatcttcactggtaaatttatctctaagtaactgcagtctaacggaa
ggagagatcctcaatcgtatttgccatatttcatcattgcaaaacttatctctggatggg
aaccattttagtagcatacctgccaacatcattcagctttctaaactgagaagcctctgc
ttgaatcactgcctgaagcttctacaaattccagagcttccaccaagtttacgagttctt
gatgtccaggactgcccatgcctggaaactttatcaagtccctcaagtttacttggttta
tccttgttcaagtgcttcgaatcagcaattgaggactatgacggcaggttctattgccag
gagaaagtcgaaattttaatgcctggaaataatggaattccggagtggataagccataag
aaaaaaggatctgaaatagtagtagagcttcccgagaattggtgggaggataacaacttt
ttgggatttgccttatgctctgttttagaatatgaagaaatttttgaattttattttgaa
tattattttgaattgaccttccatcatttttatccggatggtaacttatctgaatccaag
ttccgggatcgaggcgtgtttagccgtagacgttgctgtaatggtggtgaatcaaatgga
gtcttggtggcattttatcctaaggttgctattaagaataagggttggtcaaatgaatgg
agacatatgaaggcttcatttcatggtaaacgagagaaagtggaagagtgtgggcttcat
cttatatataaaaaacagagattccaatgccaccaaccattggcctcggttattgagtga
DBGET
integrated database retrieval system
