Vitis riparia (riverbank grape): 117911825
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Entry
117911825 CDS
T07274
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00500
Starch and sucrose metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117911825
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
117911825
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
SAPIS-gp6
Motif
Other DBs
NCBI-GeneID:
117911825
NCBI-ProteinID:
XP_034682140
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Position
1:11871587..11884542
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AA seq
901 aa
AA seq
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MSTVCIEPLFQRCRRENPRFRLKSLATKPSSLNYSRKPLRNGGSFCNFKSLHGVRPLRAA
SIDTALFETTDVFFKETFILKRTEVVEGKISIRLDPGKNGENWQLTVGCNIPGSWVLHWG
VSYIDDVGSEWDQPPLEMRPPGSVAIKDYAIETPLKKLSSASERDTLHEVTIDFSPNSEI
AAIRFVLKDEDNGAWYQHRGRDFELLLMDYLCEGTNTVGAKEGFGIWPGPLGQLSNMLLK
AEGSHPKGQDSSSVSGDLITGFYEEHSIVKEVPVDNSVNVSVKKCPETARNLLYLETDLI
GDVIVHWGVCRDDNKTWEIPAAPHPPETKLFKKKALRTLLQSKEDGHGSWGLFTLDEELE
GFLFVLKLNENTWLRCMGNDFYIPLSGSSSLPAQSRQGQSEGWGKSERVVSVPTEISGKT
AGENEIVSDAAYTDGIINDIRNLVSDISSEKRQKTKTKQAQESILQEIEKLAAEAYSIFR
SSIPTFSEEAVLETLKPPEKLTSGTGSGFEILCQGFNWESNKSGRWYLELSKKVAELSSL
GFTVVWLPPPTASVSPEGYMPTDLYNLNSRYGNSDELKALVKSFHEVGVKVLGDVVLNHR
CAHYQNQNGIWNIFGGRLNWDDRAIVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRED
IKGWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYMDASEPYFAVGEYWDSLSYTYGEMDHN
QDAHRQRIIDWINATNGAAGAFDVTTKGILHSALGRCEYWRLSDQKRKPPGVVGWWPSRA
VTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFFDHLFSHYRSEIASLISLRN
RNEIHCRSTIQITMAERDVYAAIIDEKVAMKIGPGYYEPPKGQQRWTLALEGKDYKIWEA
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgtctgcatagagcctctctttcagcgctgtcgccgagaaaaccctagattt
cgtctcaagtcgctggcaacgaagccgtcctctttgaattactctcggaagccgctccgc
aatggcgggagcttttgcaacttcaaatctcttcatggagttcgtcctctcagagctgct
tcgatcgatacagcgcttttcgagactacagacgtcttcttcaaggagacatttatattg
aagcgaactgaagtggtggagggaaagatttcaatcagattggatcccgggaagaatgga
gagaattggcagcttactgtgggatgtaacattcctggcagctgggttctgcattggggt
gtttcttatatcgatgatgttggcagtgaatgggatcagcctcctctagaaatgagacct
cctggttccgttgctattaaagactatgccatagagacaccattgaagaaattgtcctct
gcttcagaaagagatacacttcatgaagtgaccattgattttagtcctaacagtgaaatt
gctgctatacgttttgttttgaaggatgaagataatggagcttggtatcagcatcgaggg
agggattttgaacttcttcttatggattacctttgtgagggtaccaataccgtaggagca
aaggagggctttggaatatggccagggcctttgggacagctgtctaacatgcttctcaaa
gcagaaggatctcaccctaaaggtcaagatagcagcagtgtatctggagaccttattact
gggttctatgaggagcattctattgtaaaagaagtacctgtggataactcagtgaatgta
tctgtaaagaaatgtccggagacagctaggaatcttctgtacttagaaaccgatctaatt
ggagatgttattgttcattggggagtttgtcgagatgataataagacatgggaaattcca
gctgctcctcacccaccagaaacaaaactatttaagaagaaagctttgcggactctatta
cagtcaaaagaggatgggcatggaagttggggattatttactttagatgaagaacttgag
ggtttcctttttgtgctcaagttaaatgaaaacacttggttgagatgtatgggaaatgac
ttctacatccccctttcaggttcaagtagtttgcctgctcaatctaggcagggtcaatca
gaaggttggggaaaatctgagagagtggtatcagttcctacggagatatcagggaaaact
gctggagagaatgaaatagtttctgatgctgcatatactgatggaattattaatgatata
aggaatttagtgagtgatatttcctctgaaaagcgtcagaaaacaaaaaccaaacaagca
caagaaagcattctccaagagatagaaaagttagctgcagaagcctatagtatcttcaga
agctccattccaaccttttctgaggaagctgttttggaaacattaaaaccacctgaaaaa
ctcacctcaggaacaggctccgggtttgagatactgtgccaaggattcaactgggaatct
aataaatctggaagatggtacttggagctcagtaaaaaagttgcagaattatcttctctt
ggtttcactgtggtttggttgcctccacctacagcatctgtgtcacctgaaggttacatg
ccaacggatttatataacttaaattccagatatggaaatagtgatgaactaaaggctctt
gtgaagagtttccatgaagtcggtgtgaaagtcctcggagatgttgttttgaatcatcga
tgtgctcactatcagaatcaaaatggtatttggaatatttttggtggtcgtttgaattgg
gatgaccgtgcaattgttgcagatgatcctcatttccagggcaggggcaacaagagcagt
ggggataattttcatgctgctccaaacattgatcattcacaagatttcgtgagggaggac
atcaaaggatggttatgctggttgaggaaagaaattgggtatgatggatggaggcttgat
tttgttcggggattttggggtggttatgtcaaggactatatggatgcgagtgaaccttac
tttgctgtaggcgagtattgggattctctcagttatacatatggggaaatggatcataat
caagatgcgcataggcagagaatcattgactggattaatgctactaatggggctgcaggt
gcatttgatgtcacaacaaaaggaattctccattctgcactgggaagatgtgaatattgg
cgcttatctgatcagaagagaaagcctccaggggttgttggctggtggccttctcgagca
gttacctttattgagaatcatgacactggttctactcagggtcactggagatttcctggt
ggaaaggaaatgcaaggatatgcatacatcctgactcatcctgggacgccagcagttttc
tttgatcatctcttctctcactaccgatctgaaattgcatcactcatctctctcagaaat
cggaatgagatccattgtcggagtacaattcaaatcacaatggcagaaagggatgtgtat
gcagccatcatagatgaaaaagtagcgatgaagatcggaccaggttattatgagccccca
aaagggcagcagagatggactttggctcttgagggtaaagattacaagatttgggaagcc
tcataa
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