Vitis riparia (riverbank grape): 117920435
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Entry
117920435 CDS
T07274
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117920435
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
117920435
Transfer RNA biogenesis [BR:
vri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
117920435
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-GeneID:
117920435
NCBI-ProteinID:
XP_034693853
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Position
8:complement(14838066..14852710)
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AA seq
794 aa
AA seq
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MAMAVRAVNTCSIFRSTSSPPLYPFRCRLHHFGAFQCKSYPNLGLHFPICRTDRFFLSHG
GVQSCSVYSLVESVMEELHASRKRKRIYASTKMGLTSSGQLLEDKLKNQVLQKGLLLEFR
KDSERVLLAVAQKADGKKNWMVFDQNGVTSSIKPQQVTYIVPGIDNFDQTEISNFIQKAQ
DNLDPTLLEFAWNELLETNKSVTAEELAEMIFGCAEPLESYCAHLLLSKDEIYFTVLETK
GCRSVYGPRSTVQVEELLRRKLAKEAAEKELQEFVQLLKSAKSMPSHAKPPKSSWKAEEK
IQHKIESLEAYAIDACTNDDQKKTAGMILRAMGLVKTASSALNLLIDVGYFPVHVNLDLL
KFNIRVDYPDEVISAAENLLSEPFDPDEVDRKDLTHLKVYAIDVDEADELDDALSATRLL
DGRIKVWIHVADPTSLVQPGSIVDREAMKRGTSIFLPTATYPMFPEKLAMEGMSLKQGEL
CNAVTVSVVLHSDGSIAECTVDNSIIKPTYMLTYESASELLHLNLEEEVELKILSEAAAL
RLRWRRNQGAIDTSTLETRIKVANPDDPEPSINLYVEDQADPAMRLVTEMMILCGEAVAT
YGSCNNIPLPYRGQPQSNVDTSAFAHLPEGPVRSSALVKILRAAEMDFRKPIRHGVLGLP
GYVQFTSPIRRYMDLLAHYQVKAFLRGDSPPFSAGQMEGMAATVNMHARLAKRLCSSSLR
YWILEFIRRQPKEKKFRALVLRFIKDRIAALLLMEVGLQASAWVSLGKQIGDEVEVKVEE
AHPRDDVLSLKEVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcggttcgagccgtaaatacctgctccatctttcgctctacttcgtcccct
cctctctatcccttccgatgtcgtctacaccatttcggggcctttcagtgtaagagttac
cccaatttagggcttcattttccgatatgtcgcaccgatcgattttttctcagtcatggc
ggtgtccaaagctgttccgtttacagtctcgtcgaaagcgttatggaggagctccacgcc
tcacgcaaacgaaagagaatttatgcttccaccaaaatgggattaactagcagtggacag
cttcttgaagataagctgaaaaatcaagtactacaaaaaggtttgcttctggagttcagg
aaagattctgaaagggtattgctggcagtcgctcagaaagctgatggcaaaaagaactgg
atggtgttcgatcagaatggagtcacatcctccattaaaccacaacaagttacttatatt
gttccgggtattgataattttgaccagacagagatttccaactttatacagaaagctcaa
gataacttggacccaacactgcttgagtttgcttggaacgagcttctcgaaacgaacaag
tcagtaactgcagaagaattagcagagatgatttttggttgtgcggaacctcttgagagc
tattgtgcccatctcttgctctcaaaagatgaaatttacttcacagtgttggagacgaaa
ggttgccgttctgtttatgggcctcgatctactgtgcaggtagaagaacttctacgcagg
aagcttgcaaaggaggctgcagaaaaggaacttcaggagtttgtacagttactgaaatct
gcaaagtcgatgccttcacatgctaaaccccccaagtcttcctggaaggcagaagagaaa
atccagcataaaattgagtcacttgaagcttatgccattgatgcatgcacaaatgatgac
caaaagaaaacagctgggatgattcttagggcaatgggactggtcaaaacagcatcttca
gcattaaatctcctcatagatgttgggtattttcctgtacatgtcaatctcgatctgtta
aagttcaacatccgggttgattatccagatgaggttatatcagctgctgaaaatcttctg
tctgagccctttgacccagatgaggttgacagaaaggatcttactcacttgaaggtttat
gccatagatgttgatgaggctgatgagcttgatgacgccctgagtgcaacaaggttgcta
gatgggcggattaaagtttggatacatgtagcagatccaactagcctcgttcaacctgga
agcatagtagacagggaagcaatgaaaagaggaacttctattttcttgcctactgccact
tatcctatgttccctgagaaacttgccatggagggaatgagcttgaaacaaggagagctt
tgcaatgctgttactgtatctgttgtactgcattctgatggcagcattgcagaatgcaca
gtagataactccatcatcaaaccaacctatatgctgacatatgagagtgcatctgaactt
cttcatttgaacttggaagaggaggttgaactgaaaattctatctgaggctgcagctctc
cggttgcgatggcgtcgaaatcagggtgcaattgacacatccacattagaaacacgtatc
aaggtggctaatccagatgatccagagccatcaataaatctttatgttgaagaccaggct
gatcctgcaatgcgacttgtcactgagatgatgatactctgtggggaagctgtagccact
tatggttcttgcaataacattcctttaccctacagaggacagccccaatcaaatgtcgac
acatccgcatttgcacatcttccagaaggacctgttaggagctctgctcttgttaaaata
ttgcgtgctgctgaaatggattttaggaagcctatacgccatggggttttaggactgcct
ggttatgttcagtttacatctcccatccgtagatatatggatcttcttgctcattatcag
gtaaaagcatttcttagaggtgattctcctcctttctctgctggtcagatggaagggatg
gcagcaactgtgaatatgcatgctagattagccaagaggctctgtagcagcagtcttcgg
tattggatattagaatttattagaaggcaaccaaaagagaaaaagtttcgtgccctagtc
cttagatttattaaagatcggattgcagccttgctactgatggaggtgggacttcaggct
tctgcgtgggtgtctctgggaaaacagattggagatgaagttgaagttaaggtggaagaa
gcccatccgcgtgatgatgttctttctcttaaagaggttacttga
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