Vitis riparia (riverbank grape): 117928089
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Entry
117928089 CDS
T07274
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00450
Selenocompound metabolism
vri00970
Aminoacyl-tRNA biosynthesis
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117928089
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117928089
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117928089
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117928089
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117928089
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117928089
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117928089
Prokaryotic type
Other AARSs
117928089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Toprim
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
117928089
NCBI-ProteinID:
XP_034703778
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All DBs
Position
13:complement(26581764..26591608)
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AA seq
611 aa
AA seq
DB search
MAAVRVHSSIQSSLCILSHPLYSTSRHLKTRLHFPRPLFSSPSFSSGRALFYSCRADNFK
GSEREVSDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEK
IATAAAACGSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANG
DIYRADYEGLYCINCEEYKDEKELLENNCCPMHLKPCVLRKEDNYFFALSKYQKLLEETL
TQNPDFVQPSFRLNEVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYIS
ALSEDNEQPNLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGFLT
KDGMKMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLANT
IGNLLNRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACEAV
LEIGNAGNLYIDERAPWSLFKQGGAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLRIY
EQLGYTKEQFNATTWSETEWGGLKSGQVMAQPKPVFARIEIEAEGGDGGEAAKKVVKKKE
KIPHTQGVAQA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgagggtgcacagctccattcagagcagcctctgcatcttatcacaccct
ttgtactcaacaagtcgtcatctcaaaacgcgtcttcattttcctcgaccccttttctca
tctccatccttttcttctggaagagccttgttttacagttgcagagctgataattttaag
ggcagtgaacgagaagtttcagattctttcgtcctcacgactccgctttattacgtaaat
gcccctccccacatgggaagtgcctacaccactattgctgctgacgccattgctcgattt
cagaggctatcaggaaagaaagttatattcataactggcacagatgagcatggggagaag
attgccactgccgccgctgcctgtggttccagcccaagtgaacactgtgatgtcatttca
caagcttacaagacgctttggcaagatttagatatagcctacgacaagtttattcggaca
actaatcctaagcatgaagcaattgtaaaggagttctactcaagggttcttgccaatggt
gatatttaccgggctgattatgaaggactttattgcatcaattgtgaagagtataaggat
gagaaggaattgctggaaaataactgttgccctatgcacttaaagccatgtgttttgagg
aaagaagataactacttctttgccctgtcaaagtatcaaaaattgttggaagaaacttta
acacaaaatccagattttgtgcagccttctttccgtttaaatgaggtgcaaagttggatc
aaaagtggtctgagggatttttctatttcccgagcatctgtggattggggcattcctgtt
cctaatgacaacaagcagaccatatacgtctggtttgatgctttactgggttatatttca
gcactatcagaagacaatgaacaacctaatttacaaagtgcagtttcttcaggttggcct
gcctcgctacacttaattggcaaggatattttacgttttcatgcagtttactggccagct
atgttattgtcagccggattaagccttcctaagatggtttttggccatggattcttgaca
aaagatggaatgaagatgggaaaatcattggggaatacacttgaaccaaatgatttggtt
caaagatttggctcggatgcagtaagatactttttccttagggaggtggaatttggcaat
gatggggactactcggaggaccgcttcatcaatattgtcaatgcacatcttgccaacaca
attggaaatcttcttaaccgtacccttgggcttcttaaaaagaattgccaatcaactttg
gcagtcgattcaactcttgcagctgaaggcaatgcatttaaggacactgtagataagttg
gttgaaaaggctaagtttcagtatgagaacctctcattatcatcagcttgtgaggctgtg
ctagagattggtaatgctgggaacttgtacattgacgagcgtgcaccatggtctcttttt
aaacaaggtggtgctgcttctgaagctgctgcaaaggatcttgtgattatattggaagcg
atgaggattatagcaattgctttatcaccagtcactccaaggttatctttgagaatatac
gaacagcttgggtacacaaaggagcagttcaatgctacaacctggagtgaaacagaatgg
ggtgggctgaagagcggccaagtgatggctcagccaaagcctgtttttgctaggatcgag
atcgaagcagagggtggagatggaggtgaagcagcaaagaaagttgtgaagaagaaggaa
aaaataccccacactcagggagtggcacaagcctaa
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