Vitis riparia (riverbank grape): 117928122
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Entry
117928122 CDS
T07274
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vri04990
]
117928122
Domain-containing proteins not elsewhere classified [BR:
vri04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
117928122
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_12
TPR_9
SET
zf-MYND
TPR_17
TPR_10
Motif
Other DBs
NCBI-GeneID:
117928122
NCBI-ProteinID:
XP_034703873
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Position
13:complement(29413136..29479070)
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AA seq
787 aa
AA seq
DB search
MEKLKSLVPDALKRMIAESTPDDLPSTCHSLLEFFLHMQQFQMIVGDLAHSETALCCKNR
DAALESKRKGNECFSSGDYMKALSLYSQALRVAPTDADDVGKNLVVTLFVNRASVLHKMG
FLVECLRDCNRALLISPNYAKAWYRRGKANASLNGYEDAVRDLNVAMHLEESLGGRSQIE
RELKLILDQYKGNNSVDQHDQNDLGTLEEQLQIKLQCVSTPTKGRGMASLSEISQSYLVH
TEEPYAAIILKHCRDTHCHFCFNELPVDSVPCTSCSIPLYCSQHCQMQAGGQELRNNSKN
HGICTNLSSDLEKYVAGITLPKDSDSNIEWIVEHKHECKGVNWPAVLPPEIVLAGRVMVK
SVEQKKHSCNASNLMDTLELSHSYKTMAPESKLDLHIYSIVLLYCLQHSHGFELPLNGIS
ISQLIILISQIKVNSIAIVRMKFMDGYSPLDQSVNFSPAGGAFTSNMEQVRVGQAIYSVA
SLFNHSCQPNIHAYFLSRTLFLRATEHVAVGCPLELSYGPQVGQWDCKDRQKFLKDEYSF
RCECSGCSELNVSDLVLNAFRCVNPDCFGTVLDSCVIKYENEKFERFQGVPQDCISEPHL
QLKNDGIREVAHQAFANSSFHAAPGYCLHCGAYRDLEASHATVREAGIYISRLQEAIVSK
EVPATTFSDALRSLDLLKSTLHAYNKGIAEAEDWIAQAFCMIGELQPAMYHCKASIEILE
KLYGSNHIVIGYELMKLSSIQLSLGDTAAMKSISRLAAIFSWYYGPHADMMFPYLGSLQR
ETCKLVL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgaaatccttggttccggatgcccttaagcgaatgattgcagaaagcacc
cccgatgatcttccttcaacttgtcattctcttctagaattctttcttcatatgcagcag
tttcaaatgatcgttggagacctggcgcattcggaaactgctctatgttgtaagaataga
gacgcagcactggaatcgaagcggaagggcaatgaatgtttttcgagcggagattacatg
aaagctttgagtttatactcccaggcactacgtgttgctcctaccgatgcagatgatgtg
ggcaaaaatctggttgtaacactgtttgtgaaccgtgcatccgtattacataaaatgggt
tttctggtggagtgtctacgagactgcaatcgagcacttctaatttctccaaactatgca
aaggcatggtataggagaggtaaagcaaatgcttctctgaatggttatgaagatgcagtt
cgtgacttgaatgttgctatgcatttggaagagtctttgggcggaagaagtcagattgaa
agggagctaaagttaattttggaccaatataaggggaataattcagtggatcaacatgat
caaaatgacttaggtaccttagaggagcagctccagataaaattacagtgtgtctctaca
ccaactaaaggacggggaatggcttcactgagtgaaatttctcaatcttacttggttcat
actgaagaaccttatgctgcgatcatattgaagcattgtcgggatacacattgtcatttc
tgctttaatgaattgccagtagattcagtcccttgtacatcatgttcaataccactgtac
tgctctcagcattgtcaaatgcaagctggagggcaagagttgaggaataattctaagaat
catggtatttgcacaaatctatctagtgatcttgaaaaatatgttgcggggattacttta
cccaaagattctgattcaaacattgagtggattgtcgaacataaacatgaatgtaaaggt
gtaaactggcctgcagtattgcctcctgagattgttttggctggtcgagttatggtgaag
tctgtagagcaaaaaaaacattcttgcaatgcttctaacctcatggacactttggagctt
tctcacagttataaaacaatggctccagaaagcaaattggatttgcatatatattccatt
gtattgctgtattgtcttcaacattctcatggctttgaacttccattaaatggaatttct
atatcacagctcattatacttatatctcaaatcaaggtgaattctattgcaattgtccgc
atgaaattcatggatggttatagtccactagatcaatcagtgaacttttcacctgctgga
ggggctttcaccagcaacatggaacaggtcagagtggggcaagctatttattcagttgcc
agtttgtttaatcattcttgccagccaaacatccatgcatatttcctctcacgtactctc
tttctacgagcaacagaacatgtggcagtagggtgtcccctagagttatcttatggtcca
caggttgggcagtgggattgcaaagaccgccagaagtttctcaaagatgagtactcattt
agatgtgaatgcagtggttgttcagagctaaatgtatctgaccttgttctaaatgcattc
cggtgtgtaaatccagattgtttcggtacagtcttagatagctgcgtgatcaagtatgaa
aacgaaaaatttgagcgcttccaaggtgttcctcaagattgcatctcagaacctcatttg
cagttaaaaaatgatggcataagagaagtggcacaccaagcatttgccaattcctccttt
catgctgcacctggatattgtttacattgtggtgcttatcgtgatctagaagcctcacat
gcaacagtcagggaagctggaatttatatcagtaggctgcaggaagcaatagtttcaaaa
gaagttccagctaccacattttcagatgctttgagatctcttgatctactgaaatcaacg
ttgcatgcatataacaaaggcattgcagaagcagaggactggattgcacaggcattttgt
atgattggagaattacaacctgcaatgtaccattgtaaagcatcaattgagatccttgaa
aagctctatggttcaaatcacattgtcattggatatgaattgatgaagctttcgtccatt
cagctaagcttgggtgatactgctgcaatgaagagcataagccggctggctgcaatattt
tcgtggtattatggccctcatgcagacatgatgtttccatacctgggaagccttcaaaga
gaaacttgcaaacttgttctatga
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