Vitis riparia (riverbank grape): 117930102
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Entry
117930102 CDS
T07274
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117930102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117930102
Ubiquitin system [BR:
vri04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117930102
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
DUF2604
Motif
Other DBs
NCBI-GeneID:
117930102
NCBI-ProteinID:
XP_034706450
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Position
14:complement(16934518..16946940)
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AA seq
538 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDVGCRW
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagacccttactggaaaaaccataactcttgaagttgagagttct
gataccattgacaatgttaaggcaaaaatccaagacaaggagggtatcccccctgaccag
caaaggttgatttttgctggaaagcagcttgaggatggtaggactttggctgattataac
attcaaaaagagtccaccctacaccttgtacttcgtttgagaggaggaatgcaaatattt
gtcaaaacactaaccgggaagaccatcacacttgaagttgagagttcagatacgattgac
aacgtgaaggcaaagatccaggacaaggagggtattcctccagaccagcagaggcttatc
tttgctggtaagcagctggaggatggccggacattggctgattataacatccagaaggag
tccacccttcacttggttctccgtctgagaggtggcatgcaaatttttgtgaagaccctc
actggaaaaactatcacccttgaagttgagagctcagacaccattgataatgtcaaagcg
aaaatccaggacaaggagggtattcccccagaccagcagaggcttatatttgctggtaag
cagctcgaggatggccggacattggctgattataacatccagaaagagtccacccttcac
ttggttctccgtttaagaggcggcatgcaaatttttgtgaagaccctcactggaaaaact
attacccttgaagttgagagttcagacaccatcgataatgtgaaagctaaaatccaggac
aaggagggtattcccccagaccagcagaggctcatatttgctggtaaacagctggaagat
ggtcggacattggcggactacaacatccagaaggagtctacccttcacttggttctccgt
ttgagaggtggcatgcaaatttttgtgaagacccttactggtaaaactattacccttgaa
gttgagagttcagacactatcgacaatgtgaaagcaaaaatccaggacaaggaaggtatt
ccacccgaccagcagaggctaatctttgctggtaagcagctagaagatggtcgaactttg
gctgactacaatatacagaaggaatcaacccttcaccttgttctccgcctacgtgggggt
atgcagatttttgtgaagaccttaactggtaaaacaatcactcttgaagttgagagctca
gacacaattgacaatgtcaaggcgaaaatccaggacaaggaaggcattcctcctgaccaa
cagaggctgatctttgctggaaaacagcttgaggatggccgcactttggctgactacaac
atacagaaagaatccacgttgcaccttgttcttcgccttcgtggaggtatgcagatattt
gtgaagaccctcacaggtaaaactatcacactagaggtggagagctctgacaccatagat
aatgtgaaggcaaagattcaagacaaggagggtatccctccagatcagcagaggctcata
tttgctggaaagcagctagaggatgggcggaccttggcagattacaatattcagaaggaa
tctacacttcatcttgttcttcgactccgtggtggtgatgttggttgcagatggtga
DBGET
integrated database retrieval system