Vibrio ruber: RND59_08500
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Entry
RND59_08500 CDS
T09542
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vru
Vibrio ruber
Pathway
vru00020
Citrate cycle (TCA cycle)
vru00270
Cysteine and methionine metabolism
vru00620
Pyruvate metabolism
vru00630
Glyoxylate and dicarboxylate metabolism
vru00680
Methane metabolism
vru01100
Metabolic pathways
vru01110
Biosynthesis of secondary metabolites
vru01120
Microbial metabolism in diverse environments
vru01200
Carbon metabolism
Module
vru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vru_M00012
Glyoxylate cycle
vru_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RND59_08500 (mdh)
00620 Pyruvate metabolism
RND59_08500 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
RND59_08500 (mdh)
09102 Energy metabolism
00680 Methane metabolism
RND59_08500 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RND59_08500 (mdh)
Enzymes [BR:
vru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RND59_08500 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
DUF5848
Motif
Other DBs
NCBI-ProteinID:
WNJ94220
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Position
1:1871062..1871997
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AA seq
311 aa
AA seq
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MKVAVIGAAGGIGQALALLLKNHLPAGSDLALYDIAPVTPGVAKDLSHIPTPVSINGYSG
EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKSLAEKIAVVCPEACVGIITNP
VNTTVPIAAEVLKKAGVYNKRKLFGITTLDVIRSETFVSELKGKNPLDVNVPVIGGHSGV
TILPLLSQVKDVSFSDDEVAALTHRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVK
ALQGEANVIECAYIESDGGLAPFFAQPIKLGKDGIEEVLSYGELSAFEQQALDGMLDTLN
GDIQLGVDFAS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgctgttattggtgccgctggtggtatcggtcaagcccttgctctgttattg
aagaatcatctacctgccggttctgatcttgccctttacgatattgcacctgtgacaccc
ggtgtagcaaaagatctcagtcatatcccgacgcctgtttcaatcaatggctattcagga
gaagatccaacgccagcccttgaaggtgctgatgtcgtgttgatttctgcgggggttgcc
cgtaagccgggtatggatcgttcagatctgtttaacgtgaatgccgggatcgtcaaatct
cttgctgaaaaaattgcggttgtttgtcctgaagcctgtgtcggaattatcacgaatcct
gtcaatacgactgttcctattgcggctgaagtgttgaaaaaagcaggcgtttataataaa
cgtaaattgttcggtatcacgacactggatgtgatccgttcagaaacattcgtcagtgaa
ctgaaagggaaaaacccactggatgtgaatgtgccagtaatcggcggccactcaggggtg
acaattcttcctttgctttctcaggtcaaagacgtctctttctctgatgatgaagttgct
gccttaacgcaccgtattcaaaatgcaggaactgaagttgtggaagcaaaagccggtggc
ggaagtgcgacattatcaatggggcaggctgcttgtcgttttggtttgtctctcgtaaaa
gcgcttcagggtgaagccaatgtgatcgagtgcgcttatattgaaagtgatggcggactg
gcaccgttctttgctcaaccaatcaaattaggcaaagatggcattgaagaagtattgagt
tatggcgaactgagtgcgtttgaacagcaagcgctggacggtatgctggatacgttgaat
ggcgatattcagcttggtgttgatttcgcatcataa
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