Vibrio ruber: RND59_12350
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Entry
RND59_12350 CDS
T09542
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vru
Vibrio ruber
Pathway
vru00020
Citrate cycle (TCA cycle)
vru00480
Glutathione metabolism
vru01100
Metabolic pathways
vru01110
Biosynthesis of secondary metabolites
vru01120
Microbial metabolism in diverse environments
vru01200
Carbon metabolism
vru01210
2-Oxocarboxylic acid metabolism
vru01230
Biosynthesis of amino acids
Module
vru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vru_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RND59_12350
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RND59_12350
Enzymes [BR:
vru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RND59_12350
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Gene cluster
GFIT
Motif
Pfam:
IDH
RodZ_C
Peptidase_M3_N
Motif
Other DBs
NCBI-ProteinID:
WNJ94920
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Position
1:2704272..2706497
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AA seq
741 aa
AA seq
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MPTDKPTIIYTITDEAPALATYSLLPIIKSFTASSGIKVETRDISLAGRIIANFPECLTE
EQRIGDALSELGDLAQTPEANIIKLPNISASVPQLRAAIKELQEKGYNLPDYPAEPSNDA
EAAVKATYDKIKGSAVNPVLREGNSDRRAPLSVKNYAKKNPHSMGAWSADSKSHVASMEA
QDFFGTEKSLTIQGDTEVSIEFVGKNGQTKVLKKPFALLDKEIIDTSIMSQKALHAFFEQ
EIEDAKAQDVLFSLHMKATMMKVSDPVIFGEAVKVFYKDVFAKYGELFEQLGVDVNNGFG
DVYAKIQSLPAEQKAEIEASIQAVYQSRPELAMVDSDRGITNLHVPSDVIVDASMPAMIR
ASGQMWGPDGQQKDTKAVIPDRCYAGVYQTVIDFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFVIDDDGVVRVVDRDGHTLLEQTVEAGDIFRMCQAKDAPIQDWVKLAVTRAR
LSQTPAIFWLDPERAHDAELIKKVEQYLPEHDTSGLDIKIMSPVDATQYTLARMKDGQDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVQKENH
LRWDSLGEFLALAASLEHLSVTMNNKKAQVLANALDKATGVFLDENKSPSRKVGELDNRG
SHYYLAKYWAEALAAQTDDADLAAEFAPIAQQLSAEEEKIVAELSQVQGVAGDLGGYYLP
DFSKAVQVMRPSQTLNAIIGQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagacaaacctaccattatttatacgattacggacgaagcacccgctcttgca
acttattctttattgcccattatcaaatcttttaccgcatcgtcaggaattaaggttgaa
acccgggatatttcactggccgggcgtattatcgctaatttccctgaatgcctgacagaa
gaacagcgtatcggtgatgctttaagtgagctgggtgatttggctcaaacaccggaagcc
aacatcatcaagttacctaacatttcagcgtcggttcctcagttgagagctgcaattaaa
gaattacaggaaaaagggtataacctgccggattatcctgcagaaccaagtaatgatgct
gaagctgcggtaaaagcgacatacgataagatcaaaggcagtgcagtgaaccctgtgttg
cgcgaaggaaactctgaccgccgggcacctttgtctgtgaagaactatgcgaagaaaaac
ccacactcaatgggggcatggtcagccgattcgaaatcacatgtagcatccatggaagcg
caggatttctttgggactgaaaaatcgctgacgattcagggtgacactgaagtttccatt
gaatttgtgggtaaaaatggtcagaccaaggttttgaaaaaaccatttgcgttgctcgat
aaagagattatcgatacctcgatcatgagtcaaaaagcgttgcatgcattttttgagcag
gaaatcgaagacgcaaaagcgcaagatgttctgttttctctgcatatgaaagccacgatg
atgaaagtctctgaccccgtcatttttggtgaagcagtcaaggtcttctataaagacgtg
tttgctaaatacggtgagttgtttgagcagttaggtgttgatgtcaacaacggttttggc
gatgtttacgccaaaattcaatcattgccggccgagcagaaagcagaaattgaagccagt
attcaggctgtttaccagagccgccctgaactggcgatggttgactctgaccgcggtatc
accaacttgcatgtgccaagtgatgtgattgtcgatgcgtcgatgcctgcaatgattcgt
gcatccggacagatgtggggacctgacggccagcagaaagataccaaagctgtgattccg
gatcgctgttatgccggtgtttatcagaccgtgattgacttctgtaaagaacacggtgca
tttgacccttccacgatgggcagtgtaccaaacgttggtctgatggctcagaaagcggaa
gaatacggttcacatgataagacatttgtcattgatgatgacggtgttgtgcgtgtggtt
gaccgtgacggtcatacattgttggagcaaacggttgaagccggtgatatcttccggatg
tgccaggctaaagatgcaccgatccaagattgggtcaaactggcagtgacgcgtgcacgt
ttatcccagacaccagcaattttctggttggatccagagcgtgctcatgacgctgagttg
attaagaaagttgagcaatatttaccggaacatgatacatctggactggatattaaaatc
atgtcgccagtagacgcgactcaatacacgctcgcacggatgaaagacggtcaggatacc
atttctgtgactggtaatgtgctgcgtgattatctgacggatctattcccgattttagaa
ttgggcacttcggcaaaaatgctgtctatcgtgccgctgatgaatggcggtggcctgttt
gaaacgggtgccggcggctcagcaccgaaacacgtccagcaagtgcagaaagagaatcac
ctgcgttgggattcattgggcgaattcttggcattggcggcatcgttagaacatcttagc
gtgacgatgaacaacaagaaagctcaggtccttgctaatgcgttggataaagcaaccggt
gtattcttggatgaaaacaagtcaccttcacgtaaagtgggtgaactggataaccggggc
agtcactattatctggcgaaatattgggctgaggcactggcagcacagactgatgatgct
gatcttgctgctgaatttgcaccgattgcacagcagttgtcggctgaagaagagaaaatt
gttgctgagctgagtcaggttcagggtgttgccggagatttgggcggatactatttacct
gatttctctaaggctgtacaagtgatgcgtccgagccaaacattgaacgcaattattgga
cagtaa
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