Aliivibrio salmonicida: VSAL_I0794
Help
Entry
VSAL_I0794 CDS
T00782
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00540
Lipopolysaccharide biosynthesis
vsa01100
Metabolic pathways
vsa01250
Biosynthesis of nucleotide sugars
Module
vsa_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VSAL_I0794 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
VSAL_I0794 (kdsA)
Enzymes [BR:
vsa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VSAL_I0794 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
Lipid A
VSAL_I0794 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAQ78479
UniProt:
B6EHH9
LinkDB
All DBs
Position
1:879657..880511
Genome browser
AA seq
284 aa
AA seq
DB search
MQNQKTVKIGNIDVANDKPFTLFAGMNVLESRDLAMRMCETYVEITDRLGIPYVFKASFD
KANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDIHTEAQAQPVADVVDVIQLPAFLA
RQTDLVETMARTGAVINVKKPQFMSPDQVGNIVDKFAECGNENIILCERGSCMGYDNLVV
DMLGFGVMKKVSNGSPIIFDVTHSLQNRDPSGKASGGRRSQTVELAKAGLATGIAGLFIE
AHPTPDKALCDGPSALPLDQLEPFLKQMKALDDLIKGFEHIDIK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaaaaaacagtaaaaattggcaatatcgatgtagcaaatgataagccgttt
accttatttgcaggtatgaatgtattagagtctcgtgatttggctatgcgcatgtgtgag
acttacgtagagatcactgatcgattaggcatcccatacgtatttaaagcgtcttttgat
aaagcaaaccgttcgtcagttcattcgtaccgtggtcctggtatggaagaaggtctaaag
atttttcaagaattgaaagatacgtttggtgtgaaaatcattacggatattcatacagag
gcacaagctcaacctgttgctgatgtggtggacgttattcaacttcctgctttccttgct
cgtcaaactgatttagttgagacaatggctagaacgggtgctgtcattaacgtgaaaaaa
ccacaattcatgagccctgatcaagtcggcaatattgttgataagtttgctgagtgtggt
aatgaaaatatcattctttgtgagcgtggttcatgcatgggttatgacaacctagtggtt
gacatgcttggctttggtgtgatgaaaaaagtatcaaatggcagcccaatcatttttgat
gtgacgcattctttacagaatcgcgatccaagtggtaaagcatctggtggtcgtcgttca
caaacggttgaacttgctaaagcaggtttagcgacgggtattgctgggttatttattgaa
gctcacccaacgccagataaagcactgtgtgacggtccttctgcattaccattagatcaa
ctagaacctttcttaaaacaaatgaaagcgttagatgacttaattaaaggctttgagcac
atcgatattaaataa
DBGET
integrated database retrieval system
