Vibrio scophthalmi: VSVS12_00218
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Entry
VSVS12_00218 CDS
T04650
Name
(GenBank) putative HTH-type transcriptional regulator YbdO
Organism
vsc
Vibrio scophthalmi
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ANS84042
UniProt:
A0A1B1NK17
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Position
1:234565..235506
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AA seq
313 aa
AA seq
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MELEDIYRRDLNLLVALRVLIEESSVSKAATRLNLSQSAMSRVLGRLRTLLNDPLFTRQG
QQLIPTEKALEINARLGDPLESLRQLLSPREFDPQRCEQTFTIATTDYALQTILPFALPR
IYQEAPLVSLNFLPLQHDRLADQLTYEGADLAICRPIGTVDPLCSEVIGRVGVFCLLSKQ
HPLAEQEMSLDDYLSYPHAMIAVSDGVKALIEQALVGHPQRRMVLRAYHLEAALAIVDTM
PLIITVPADLAYLVAERYDLVVKPLPFHFTPFDYSLIWHPRCEHSPAQEWLRAIVKEECS
RLIAKRIEDMGLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggaactagaagatatctatcgtcgtgatttgaatttattggtcgcactgcgagtgtta
attgaagagagcagtgtcagcaaagcggcgacgcgactcaacctcagtcagtcggcgatg
agccgggtgctaggtcgcttacgcaccttactcaacgatccactgtttactcgtcaagga
cagcaactgatcccaaccgaaaaagcgttagagattaatgcgcgtttaggggaccctctg
gagtcgttacgtcaactgttgtcacctcgtgagtttgatccacagcgttgcgagcaaacc
tttaccatcgcgacgaccgattatgcattacaaacgattttgccgtttgcgctcccccgc
atctatcaagaagcgccgctggtgtcgcttaatttcttgccattgcagcatgaccgattg
gccgatcagttgacctacgaaggggcagatttagcgatttgtcgtccgattgggaccgtt
gacccgctgtgtagtgaagtcattggccgcgttggcgtattttgcttgctctctaaacag
catccgctggcggagcaagagatgagtctagacgattatcttagctatcctcacgcgatg
attgcagtgagtgatggggtgaaagcactaatagaacaagctttggttggtcacccacag
cgtcgcatggtgttgcgggcttatcatttggaagcagcattggcgattgtggataccatg
ccattgatcattacggttcccgctgatttggcttatttggttgctgagcgttatgacttg
gtggtgaaaccattgccgtttcacttcacgccatttgactattcattgatttggcatccg
cgctgtgagcattcaccagcccaagagtggttacgagcgattgttaaagaagagtgcagt
cgtttgattgccaaacgtattgaagatatgggtttagattga
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