Vibrio scophthalmi: VSVS12_00352
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Entry
VSVS12_00352 CDS
T04650
Symbol
kdtA
Name
(GenBank) Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00540
Lipopolysaccharide biosynthesis
vsc01100
Metabolic pathways
Module
vsc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VSVS12_00352 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
VSVS12_00352 (kdtA)
Enzymes [BR:
vsc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VSVS12_00352 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VSVS12_00352 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VSVS12_00352 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VSVS12_00352 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
Lipid A
VSVS12_00352 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
ANS84169
UniProt:
A0A1B1NKH0
LinkDB
All DBs
Position
1:complement(372290..373588)
Genome browser
AA seq
432 aa
AA seq
DB search
MLVRALYTLVLTLAAPLLLFGLYRSKPNKPKFGQRWKEHFGITPALTETAGKAITAGKPI
WIHAVSVGECIAATPLIKAIKAECPEQTIVVTTTTSTGAEQIEKLGDLVEHRYMPIDFSF
AVRGFLRTIQPEKMLIIETELWPNTLHTVHSAGIPIIVVNARLSEKSCLNYARLQPLFNL
IQPCLSKVLCQSQADAERFARLGIQQEKLEITGSIKFDIQISDTIKQKGKELRGKLGNNR
PIWIAASTHKGEDELLLAAHQEVLKQHPNALMILVPRHPERFNAVFELSNEAQFKTVRRT
SNETVTEDTQVYLGDTMGEMLILMGAADISFIGGSLLGDKVGGHNVLEPAALGVPVITGP
SYFNFKEITDELVAKHGIWLKSADELSEALITLFEQPHAREQLIAGANKMVTCNQGALKQ
TLQLIRGHFAVN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcgtgcgctttatacgttagtactcacccttgctgcaccattactattattt
gggttatatcgaagtaagccgaataagcctaaatttggccagcgctggaaagagcatttt
ggtatcacgccagccctaacagagactgcaggaaaagctataactgctgggaaaccaatt
tggatccatgcggtttctgttggtgaatgcatcgctgcgactcccctaattaaagcaata
aaagcagaatgccctgaacagacgatcgttgtcaccacgaccacaagtactggcgcggaa
caaatagagaagctaggtgatttagttgaacaccgttacatgccgattgatttttcattt
gcagttcgtggttttctacgcaccattcagcctgaaaaaatgttaatcattgaaactgag
ttgtggccaaacaccctacatacagttcattccgcaggcattcctataatcgtcgtgaat
gctcgattatctgaaaagtcttgcctgaactacgcaaggcttcaaccactatttaatctt
atccaaccgtgtttaagcaaagtattgtgccaatctcaagcagatgcagagcgatttgct
cgcttaggcatccaacaagaaaaacttgaaattacgggttccattaagtttgatattcaa
atatccgatactatcaaacaaaaaggcaaagagctccgagggaagctaggcaataaccgc
ccgatatggattgctgccagcactcataaaggtgaagatgaactactccttgctgcacat
caagaggtgttaaaacaacaccctaacgcattgatgatccttgttcctcgccacccggaa
cgttttaatgcagtttttgagcttagtaacgaagctcaatttaagactgtaagacgtacc
tctaatgaaaccgtcacagaagatacgcaagtctaccttggtgatactatgggtgagatg
ctcatactaatgggcgcggcggatatcagctttataggtggtagcttactcggtgataaa
gttggaggtcataatgtgttagaacccgcagctctaggtgttcctgttattactgggccg
agttattttaactttaaagaaatcactgatgagttggtggctaagcacggcatttggctt
aaaagtgctgatgaactcagtgaggctttaataaccttgtttgagcaaccacacgcacgt
gagcaattgatcgcgggtgcgaacaagatggtgacatgcaatcaaggagctctgaaacag
acattacagttgatcagaggtcattttgcagtgaattga
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