Vibrio mediterranei: BSZ05_09655
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Entry
BSZ05_09655 CDS
T04936
Name
(GenBank) hypothetical protein
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03030
DNA replication
vsh03430
Mismatch repair
vsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSZ05_09655
03430 Mismatch repair
BSZ05_09655
03440 Homologous recombination
BSZ05_09655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsh03032
]
BSZ05_09655
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_09655
Enzymes [BR:
vsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSZ05_09655
DNA replication proteins [BR:
vsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSZ05_09655
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSZ05_09655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
ASI90025
LinkDB
All DBs
Position
1:2048428..2048859
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AA seq
143 aa
AA seq
DB search
MQDSIKLQLMGVQTWELTHPERIPVRSSPSLSLRPDCRLLFVSSVKPQGDNVLFYQKILK
AMKLDLSETLHIAPEQLLSLDGQHIPEWIWFAGEEQANERFAQLTQQYQFTTSPKKLVSP
QLSNIDGNDMERRALWNQIRSYG
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacagcataaaactacagttaatgggcgttcaaacatgggaactaactcaccct
gagcgtattcctgtgcgtagtagcccttcgttgtcacttcggcctgactgtcgtctcttg
tttgtttcatcagtaaagccgcaaggcgataatgtgctgttttatcagaaaatccttaaa
gcgatgaagttggatcttagtgagacgctacatattgctccagaacaattacttagtctt
gatggtcaacatataccagaatggatatggtttgctggagaagaacaggcaaatgagcgc
tttgctcaattaacgcaacagtatcaattcaccacgtccccgaaaaaactcgtttctccg
caactgtctaacattgatggtaatgatatggaaagacgtgcactttggaatcaaatccgc
agctatggctaa
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