Vibrio atlanticus: VS_II1362
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Entry
VS_II1362 CDS
T00812
Name
(GenBank) Probable ABC-type uncharacterized transport system, periplasmic component
KO
K11925
SgrR family transcriptional regulator
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_II1362
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
Other families
VS_II1362
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
MarR_2
MarR
HTH_36
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAV27455
UniProt:
B7VTA8
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Position
2:1498985..1500721
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AA seq
578 aa
AA seq
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MHYWKALAFLRSRVLINQPTQLSLTEITEALGCTKRNAQLIIKKLVNEGWIDWKSGVGRG
NLPTLTLLKNVNHELELRIDELLSENKVDQALELIEESQRDQFLLGYISRYQSLPTTLDI
LQIPFYRGTHSLDPIEVTRRTEAHITRYLFSNLLRFNTRTHSFEGDLAIDWSQDENRWYF
TLRKGLVFHDGSSILAQDIKAHFLRLIGSSHHNSQQFKCISTITVIDPLHLCFAINANAG
YLPSLLSSSAAGIAKKVGEQIIGSGSFKLVEQSEWLTRLEAFKAYYGHRPWVDGIEIWNV
GDKAKDYEMHCDIVHSHPHYQQSLLQNELAEIEQWEKGCEYALLNSHRHPWLAEPQHLRS
LNDLLRLLGVAKDIPLNTVGYAYGMLSTSSQPSKSKLVTANDKDALKVARQFADKLNKPK
QPIKILTYQLFDHIKMARHYCEQLNELGFSCEYQVLEFPDFCQQSNLQNADILISGEVFS
DNLDSSWMGWLQSSIALEVCLTDEQKQWRNKSLEQLWVLNDYHQRQSAFLELEAQLIEFG
AYRPIFHVKQQLNYAKTVNPVEQLANGWIDFNQITMRR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcattactggaaggcactggcatttttacgttctcgggtactcattaaccaaccaact
caactttcgcttacagaaattactgaagctctaggttgtaccaaacgcaacgctcaactg
attatcaaaaagctagtaaacgaaggctggattgattggaagtcaggcgttggacggggc
aacctacccacactcactctactcaaaaacgtgaaccatgagttggaactgaggattgat
gaattactatcggaaaacaaggtcgaccaagctttagagcttattgaagagtcgcaacgc
gatcagttcctgcttggttatatcagccgctatcagagcttgccgactacgctcgatatt
ctgcaaatccctttctatagaggcacacatagcctagacccgattgaagtgacacgacgc
actgaagcacacatcacccgttacctgttcagtaacttactgcgtttcaacacgcgtact
cactcgtttgaaggtgatcttgcaattgactggtcccaagatgaaaatcgttggtatttc
actttgcgaaaaggcttagtgtttcatgacggctcatcgattctagcgcaagacatcaaa
gcgcactttctacgcctgatcggcagcagccatcacaatagtcagcaatttaaatgcatc
tctaccattacggttatcgatccgcttcacctctgttttgctatcaatgccaacgcaggc
taccttccatcgctactatcgagctctgccgcaggtattgccaagaaagtaggagaacaa
atcattggaagtggcagctttaaactagtggaacagtcagagtggctaaccagactcgaa
gctttcaaggcctactatgggcaccgaccttgggtagacggcattgagatttggaatgtt
ggcgataaagccaaagactatgaaatgcactgcgacattgttcactcacatccgcactat
caacaatcgttattacagaacgagctagcagagatagagcagtgggagaaaggctgcgag
tacgccttgctcaactcacatcgccacccttggctcgcagaaccacaacaccttaggtca
ctgaatgatttactgcgtttacttggtgtcgcgaaagacattcctctgaatactgtcggc
tacgcatatggaatgctgtcgacgtctagtcagccatcgaaatctaagctagtgacggcg
aatgacaaagacgcattaaaagtggctcgacaattcgcagataaactaaacaagcctaaa
caaccgataaaaatcctaacctatcagctgtttgatcacataaaaatggctcgccactat
tgtgaacaacttaatgaacttggttttagctgcgaatatcaggtgctcgaatttccagat
ttttgccaacaaagcaacctacaaaatgcggatatattgatcagtggtgaagtgttttca
gacaatctcgacagcagctggatgggatggctacaaagttctattgcattagaggtttgt
ttaactgacgagcaaaaacagtggcgtaacaaaagccttgaacagctatgggttctcaat
gactaccaccagcgacaatcggcctttctagagcttgaggcacaattaatagagttcggt
gcttatagaccgattttccacgtaaaacagcaactcaattatgctaaaacagttaatcct
gttgagcagctggcgaatggttggatcgatttcaaccaaatcactatgcgtcgctga
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