Vibrio spartinae: Vspart_00553
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Entry
Vspart_00553 CDS
T07037
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsr01011
]
Vspart_00553 (ampD)
Enzymes [BR:
vsr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Vspart_00553 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsr01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Vspart_00553 (ampD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
QMV13328
UniProt:
A0A7D8B2D1
LinkDB
All DBs
Position
1:594225..594791
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AA seq
188 aa
AA seq
DB search
MIDPNGWYDKAQQVISPFYDQRESPEDISLLVIHNISLPPGQFGGPYIEQLFQGKLQAEQ
HPFFQVVADFRVSAHCLIRRDGHVIQFVSFLDRAWHAGVSSFAGRARCNDYSIGIELEGT
ELTAYTDAQYQSLATLTQAILARYPQISQQRITGHQYIAPLRKTDPGLTFDWRRYRHMLK
NNVNDMLR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccgaatggatggtacgataaagctcaacaggtgatttctccgttttatgat
caacgggaaagccctgaggatatatccttgttggtgatccacaatatcagtctgccaccg
gggcaatttggcgggccttacatcgagcagctttttcagggcaaactacaggcggagcag
catcctttctttcaagttgttgctgattttcgggtgtctgcgcactgtctgatccgacgt
gacggccatgtgattcagtttgtttcttttctggaccgggcatggcacgctggtgtgtct
tcgtttgccggacgggctcgctgcaacgattattcgattggtattgaattagaaggcacc
gaattgaccgcgtataccgatgcgcagtaccagtctctggcaacattgacccaagctatc
ctcgcgcgctatccgcagatctcccagcaacgtattaccggtcatcagtacattgcaccg
ctacgcaaaacggatccggggttaacctttgactggcggcgctatcgacacatgctgaaa
aataacgtcaatgatatgctgagatga
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