Vibrio spartinae: Vspart_01544
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Entry
Vspart_01544 CDS
T07037
Symbol
ddpD
Name
(GenBank) putative D,D-dipeptide transport ATP-binding protein DdpD
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
vsr
Vibrio spartinae
Pathway
vsr01503
Cationic antimicrobial peptide (CAMP) resistance
vsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vspart_01544 (ddpD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Vspart_01544 (ddpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_01544 (ddpD)
Transporters [BR:
vsr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Vspart_01544 (ddpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA
ThiI
Sigma54_activat
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QMV14290
UniProt:
A0A1N6M6W1
LinkDB
All DBs
Position
1:complement(1720790..1721785)
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AA seq
331 aa
AA seq
DB search
MPMLDIRHLTIEIDTPQGLVKAVDRISLTMNEGEIRGLVGESGSGKSLVAKAIVGVCKEN
WRITADRMRLGNIDLLQLTPRERRRVIARDIAMIFQEPSTCLDPSDEVGKQLLEAIPSHT
FKGQWWQRFSWRKKQAIALLHKVGIKDHHRILKSYPYEITDGECQKVMIAMAIATKPKLL
IADEPTNDLDPITQSQILRLLSRMNQVNNTTILLIGHDLTTITQWAHRITVMYCGQSIES
AMTRNILATPKHPYTVALLTAMPDFSSSIPHKQKLNSLPGSIPPLQHLPIGCRLGPRCPY
AQRQCVEIPKSRWIKNHKYSCHYPLNMEETQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgctggatattcgtcatctgacgattgaaattgatacgccacaagggcttgtc
aaagcggtagatcgcatcagtctgaccatgaatgaaggtgaaattcgtggtttagtgggt
gagtcaggctctggtaaaagtcttgttgccaaagctattgtcggtgtatgtaaagaaaac
tggcgtattactgctgaccggatgaggctaggcaatatcgatttgctgcaacttacgcca
cgggaacgtcggcgtgtgattgcccgagatatcgccatgatatttcaggagccttcaacg
tgtcttgacccttcagatgaggtgggaaaacagttgctcgaagccatcccgtcccataca
tttaaagggcaatggtggcaacgcttttcatggcgtaaaaaacaagccattgctttactg
cataaagtggggattaaagatcaccatcgtattttaaaaagctatccctatgaaattacc
gatggtgaatgccaaaaagtgatgatcgcaatggcgattgccacaaagcccaaattactg
atagcagatgaaccaaccaatgacctcgatccaatcacacagtcgcaaatactgcgtctg
ttaagccgaatgaatcaggtcaataacacgacaattctattgatcggacacgatctgacc
accattacgcaatgggcacatcgtattacggtgatgtactgtggtcagtcaatcgagtct
gcgatgactcgcaatattttggctacgccaaaacacccatatactgtcgcgctattgaca
gccatgccagatttcagctcatcaatcccacataagcagaaattaaactcactgccgggg
tcaattccgccgctacaacatttaccgattggttgtcggctcggcccaaggtgcccctat
gcgcaacgccaatgtgtggaaatcccgaaaagccgctggattaaaaatcataaatactcc
tgccactatccgttgaatatggaagagacacaatga
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