Vibrio tapetis subsp. tapetis: B1210
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Entry
B1210 CDS
T05424
Symbol
oppD
Name
(GenBank) oligopeptide transporter subunit; ATP-binding component of ABC superfamily
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1210 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vta02000
]
B1210 (oppD)
Transporters [BR:
vta02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B1210 (oppD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA
AAA_22
Mg_chelatase
SLFN-g3_helicase
ATP-synt_ab
DUF87
Herpes_ori_bp
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SON52821
UniProt:
A0A2N8ZLM9
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Position
B:complement(1247724..1248737)
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AA seq
337 aa
AA seq
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MDPVSMKNDCILSVEGLETTFTTDDGDITVLNEVSFDVSKGKTIGIVGESGCGKSVTAAS
IMGLLPHPYGKITAGSILYKGKDLVQMPAEALYQTRGNEISMIFQDPMTALNPVHTIGKQ
LCEVYELHKPDLSRKQQKQAAIEMLKQVGIPAAEQRINNYPHELSGGMRQRVMIAIALAC
NPDVLIADEPTTALDVTVQAQILDLMSEMQDKSNMAIVLITHDMGVVAQSCDEVVVMYAG
NVVEKADVYTLFDSPRHPYTQGLLQSIPRMDGEPKSQLGTIPGSVPSLHEMPSGCRFRSR
CQYQMPQCATRIPKLMSIGHHHSVSCFLMSEEGNVNG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgtaagcatgaaaaatgattgtattttgtcagtggaaggccttgaaacaacc
tttacaacggatgatggtgatatcaccgttctcaatgaggtttcttttgatgtctctaag
ggaaaaaccattggtattgttggtgagtctgggtgtggtaaaagtgtgaccgccgcatcc
atcatggggctactccctcatccatacggaaaaataacggcgggctcaattctttacaag
ggcaaagatcttgtacaaatgccagcagaagcactgtaccaaactcgtggtaatgaaatc
tcgatgattttccaagatcctatgacggcgttaaaccctgttcatactatcgggaaacaa
ctttgcgaggtgtatgaactgcacaaacctgacctatcgcgcaaacagcaaaaacaggca
gcgatagagatgttaaaacaagtcggcattcctgccgccgaacaaagaatcaataactac
cctcacgagctatcaggaggcatgcgtcaacgtgtgatgatcgcgatcgcactagcttgc
aaccctgatgtcttgattgccgatgaaccaacaaccgcattagacgttacggtgcaggct
caaatactcgatttgatgagcgagatgcaagacaagagcaacatggccattgtgttgatc
actcatgatatgggggtcgtcgctcaaagttgtgacgaagtggtggttatgtacgcaggt
aatgtcgttgaaaaagccgacgtctataccttatttgattctccacgccacccatatacg
caaggactacttcagtcaattccaagaatggatggcgaaccaaaatcacaacttggcacc
attccgggttcagtacccagcttgcacgagatgccatctggctgccgatttcgaagccgg
tgccaataccaaatgccgcaatgtgccacccgaataccgaaactgatgtctattggtcat
catcactccgtcagctgctttcttatgtcagaggaaggaaacgtaaatggctaa
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