Vigna umbellata (ricebean): 124833721
Help
Entry
124833721 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vum03016
]
124833721
Enzymes [BR:
vum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
124833721
Transfer RNA biogenesis [BR:
vum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124833721
BRITE hierarchy
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_6
MTS
Cons_hypoth95
DNA_methylase
DUF1668
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
124833721
NCBI-ProteinID:
XP_047164223
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MEFEKRKAATLASLVSTESDKSPKGFLDAPIVPLLNALNQNPSYFTTSSCSGRISILSQP
ISEAPNPKKKARGGTWLFVSHDPADPDSVLSLLFPSEPTPSPFVSELVFRFEPLIIALEC
RDLSAAHSLVSLAISCGFRESGITNAKKRVIIAIRCSIRMEVPLGDTRTVMVTPEYVRYL
VRVANDKMEANRKRTQRFFQVLQSTDSLIADSGDRLLPTNEACSHLEKVXIFEWLAGSVS
SPGSGLSISHFDIVGEPAEKLFLWGHSACVLNKAGDKKLIIFGGFGGLGRHARRNGLLLL
DPYSGNLEIVSTVDCASPTPRLGHTASVVENCMFVIGGRTGPDKILSDVWILDTTMNSWK
LLXFSENLFPPRHRHAAAIMGSNIYVFGGLDNDTIFSSFYVFDTKTLHWKEIPVSGDWPC
ARHSHAMVASDSQIFMFGGYNGGKALGDLYSFDVQKGQWTKERTTGRNPHARFSHSIFVH
KNYLGVLGGCPVRQHCEELALLDLKLRLWKHVTLNSVGKDLFVRSTTNVVGDDLVIVGGG
ASCYAFGTKFSEPAKVNLLHIIHSRDGHVSIKNQRKYVINQDEGTKTNNIESSCQPQLEL
RPNLFEDESLCSNDNLPFLKDQSQMIALHYILQLKKKYAKLGKDILKKFGWLDLGRKART
EEGGVHICFPVRQEFFAVFHERNNHLLDASDGQNEAPFLKPHKQDKYLLNELSYAEALTI
LHEYGANILEDKVVEERKAAKSPLKVMIEAVTSLIEHKGLPMRLLEELPTRWDRLGDIII
LPINSFKDSLWDSIAGELWLIVAKSLKAHRLARQGPVAATGTRDSTLQILVGDSGWVNHR
ENGVLYSFDATKCMFSWGNLSEKIRMASLDCREEVVVDLFAGIGYFVLPFLVRAKAKFVY
ACEWNPHAVEALRHNLQANSVADRCIILEGDNRVTAPRSMADRVCLGLIPSSEPSWVTAV
KALRREGGVLHVHGNTKDSEESQWIDHVAKSINDIARSEGCCWEISIEHVERVKWYAPHI
RHVVVDVRCRQIQR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaaaagagaaaagccgcgacactggcctcactggtttcaacggaatcagac
aaatctccgaagggctttttggacgcacccatcgttcctctcttgaacgctctgaaccaa
aacccttcttacttcaccacaagttcctgctccggtcgaatctccatcctctcccaaccc
atctccgaagctccaaaccctaaaaagaaagccagaggcggcacgtggctcttcgtttcg
cacgaccccgccgatcccgactcggtcctctccctcctcttcccctccgagccaactccc
tcccccttcgtctccgaactcgtcttccgattcgagcccctcataattgctctcgagtgc
agagacctctccgccgctcactccctcgtttccctcgccatctcctgcggctttagagag
agtggcattaccaatgccaagaagcgcgtcattatcgccattcgctgctccattcgcatg
gaggtgccgttgggggatacgcgcactgtcatggtcacgcccgagtatgttcgttatctc
gttcgggtcgcaaatgacaagatggaagctaataggaagagaactcagagatttttccaa
gttttgcagtccactgattccttgattgctgatagcggggaccgtttgttgccgacgaat
gaagcttgcagccatcttgaaaaagtctgaatctttgaatggttggcagggtctgtgagt
tctcctggttctggtctatcaattagccattttgatattgtcggtgaaccagcagagaag
cttttcctttggggccactcagcttgtgtattgaataaggctggtgacaagaaacttatc
atttttggtggctttggaggcttgggaagacatgccaggagaaatggtttgttgctgctt
gatccatattctggcaatcttgaaattgttagcactgttgattgtgcttctcccactcca
cgattgggccatacagcttctgttgttgaaaattgcatgtttgtgattggaggtcggact
ggtcctgacaaaattcttagtgatgtatggatcctagatacaacgatgaattcttggaag
ttactgtaatttagtgaaaatttatttccacccaggcatcgtcatgctgcagctatcatg
ggttccaacatttatgtatttgggggccttgataatgatactatcttttcttccttttat
gtttttgacacaaaaactttacactggaaagaaataccagtgtctggagattggccatgt
gcgcgtcactcacatgctatggtggcttctgattctcaaattttcatgtttggtggatac
aatggtgggaaagcacttggggatctgtatagttttgatgttcagaagggccaatggaca
aaggaaaggacaacaggaaggaatccacatgccagattctcccattcaatttttgtccat
aagaattatcttggagttctcggtggttgccctgttagacaacactgtgaagagttggct
ttacttgatttgaagcttcgtctatggaagcatgtaacactcaattctgtaggtaaagat
ttgtttgtgcgtagtacaaccaatgttgttggtgacgatcttgtcattgttggtggcggt
gcatcatgctatgcatttggaacaaagttcagtgagcctgcaaaagtcaacttgctccat
ataatccattcgcgtgatggtcatgtgtctataaaaaatcaaagaaaatatgtgattaac
caagatgaaggaacaaagacgaataacattgaaagttcatgtcaaccccaacttgaactt
agaccaaatttatttgaagatgaaagtttatgttctaatgataacctacccttcttgaag
gatcaaagtcagatgattgcattgcattatattttgcaactcaaaaagaaatatgcaaaa
ttgggaaaggatatattgaagaaatttggatggttagacttggggaggaaggcacgcact
gaagaggggggagtacatatctgttttcctgttcgtcaagaattttttgccgtatttcat
gaaaggaataatcatttgctagatgcatcagatggacaaaatgaagctccctttttaaaa
ccacataaacaagataaatacttgttaaatgagttatcctatgctgaagcattgaccatt
ctccatgagtatggtgccaatattcttgaagacaaggttgttgaagaaagaaaagctgcc
aaatctcctttaaaagtgatgatcgaagcagtaacgtctttgattgagcataaaggcctg
ccaatgcggcttctagaggaactgcctacaagatgggaccggcttggagatattattata
cttccaattaattcttttaaggattccctgtgggactccattgcaggagagctttggctc
attgttgccaaatcactcaaggctcaccgtcttgctcgccagggcccagttgctgcaact
ggtacaagagatagcacattgcagattcttgttggagatagtggctgggtcaatcatcga
gaaaatggagtactctattcttttgatgctacaaaatgcatgttttcatggggtaatctt
tctgagaaaatccggatggccagtctggattgtagagaggaggttgtagtcgaccttttt
gcgggcattggctactttgtgcttcctttcctcgtcagggccaaggcaaaatttgtatat
gcttgtgagtggaatccacatgcagtagaagcactccgacataatctccaagcaaattct
gtggctgatcgttgtatcatacttgaaggagataatcgagttactgctcccaggagtatg
gctgatagagtttgtcttggtctcattccatctagtgaacctagctgggtaacagctgtg
aaggctttaagaagagagggtggagttttacatgtccatgggaatacaaaagactcagag
gagagtcagtggattgatcatgtagcaaaatcaataaatgacatcgctagatcggaaggt
tgctgctgggagatttctatagaacatgttgagagggtaaaatggtatgctccacatatt
cgtcacgttgtggtggatgtaagatgcagacaaatccaaagatag
DBGET
integrated database retrieval system
