Vigna umbellata (ricebean): 124848406
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Entry
124848406 CDS
T09662
Name
(RefSeq) uncharacterized protein LOC124848406
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124848406
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124848406
Surveillance factors
Other surveillance factors
124848406
BRITE hierarchy
Motif
Pfam:
GYF
Tis11B_N
Motif
Other DBs
NCBI-GeneID:
124848406
NCBI-ProteinID:
XP_047182027
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MGDGKVNLPDDLFLSKTSDSLRDEASGGHGGEKGIAALLDDSKDQLSSENSIPLSPQWLY
SKPVDARTPTNPVGVNSTDPILKDSWRLEGSQDKKDWRRTTPDVDISRRWREEERETSLL
GRRDRRKEDRRLENTSTSENRSLPSDRWHESRGSGHDSRRENKWSSRWGPEDKEKDSRSE
KRNDVEKEDGHTEKQSSVGGNRIGSDRDTDSRDKWRPRHRLEAQAAGVATYRAAPGFGLE
KGRTEGSNVRFSPGRGRANINGNLQIVRSPIGSSLGSALVDRNKTILGKSSLGADSYYYP
RGKLLDIYRKQKVDPNFDSLPSEMEHISPFTQPGAVEPLSFVAPGAEEEVVLKEIWKGKI
TSSEVAGYSFRGRDGGSNDDISGPVLVSEGKQQPSIGSSAKVISGSVSDDSDQILISSAS
TAGGLLRNIVGEVATVQEGKQKHMPAIGVHGRDESSVSIIGDGSIPGNKVVESATFDLHQ
GQSLAFLEHANRNGVDSIGGSEINSSLPDDSRTLFDFSSLQQTPNVNQQDFKINEKTYVP
ESVIALEELSLCYLDPQGEIQGPFLGIDIILWFEQGFFGMDLPVRLSDAPEGSPFHELGD
IMPHLKVKSGLGSGSNRVIQSEPSDAIGRNLKVDVHNFDYDGSSASDDQPWSSSRPDTSS
SVGIPAQIPNHSYHSEVKFSDDQGFSNIAAHDEDISLSKLAGSINDKPLMRPMDVNTLHS
HPTGKSLANEVALSDSHHEADKLHPFGLLMSELRDGSHLRRAQSSNSSLRLGDQGHFLDP
LMDRDASFTDQQSSISGMVNQPSFREKWGDKYGTIRHFQEDQFLSHIGQIQKERLQQQSN
ISNHFPGHLNGSELDRFPGYALSQNMNSNLQQMMQNSGSDFERILEHQIQQYQLELQQQQ
DMHHQQLLHQQMKLQPQQQSQVQQLLHEQFMQQPIPDPNFGQSKHDISRDNLLDQVQMRR
YINDLHLNSHSLRHLDPSMEHIIQANMGLNAAQGRQADLSDLLLQARHGNILPSEQLHFQ
QDQLQAQQLSLAFRQQLGLDGERHFGRSWPINETGQLIRNPGTHQLGLSAGFNVSDIHKQ
QQRLVTQEEQLNYLGRNLPEQNQRGFYDNPMMFERSAPISQGRELHDRRRYLHRGDQMDS
LSSHHLQPTDDLFGHHPDAFKSSLHVNNGHVENSWIDPRVQLQQHLEAVRQRRELGDAVS
SADLNMSGSVVSHEDSSARGFMDLLHKKLGVQSAQPSAVDKWHPLSSRSDKSWHVPEASS
IMHPFELQPDHQQVHLNDPFLERAQSTNSNALIHDHLSSMHISDQYNSLGNTERMPLRSR
SGSLLEEQSLLSANMDPLHPNYRIPFQIGKSSMEKDLLELEANKGQRHEYMGTMNNLVPG
MSDMSEQVESIMNSMELPAIAHSRHSSLSSAGGDGSFGREIGLNNSRGDEVSGDRIPPST
KGFDNTFLKRPHVSRVLSSPDVQSDQPSAPSVNQNNLINLTASEGRREPSANSSMSSMTD
AQAAGKKEVRFRSSSFSEGAVSETSFIDMLKKPVLPEVVVDSHAASGVGSESSDAAQAAR
GGKKKGKKGKQIDPSLLGFKVSSNRIMMGEIQRPED
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacggcaaggtcaatctccctgacgatctcttcctctccaagacttctgattcc
ctcagagatgaagcatccggaggacatggtggggagaaagggattgcagcgctacttgat
gattcgaaagatcaattgtcatctgagaacagcatacccctatccccacagtggctgtat
tccaaacctgttgatgcaaggacacctaccaatccggtgggggtgaactcaactgatccc
atactgaaggatagttggcgtttggaggggtcccaggacaagaaagactggaggaggaca
actcctgatgttgacatcagtcgccgctggcgtgaagaggagagggaaacaagcttgctt
gggagaagggatcgtagaaaagaagatcgtcgtttggagaatacttcaacatcagagaat
agatccttgccctctgatcgctggcatgagagccgtggttctggccatgactctagaaga
gagaataagtggtcatcaagatggggtcctgaagataaagagaaggattctcgaagtgaa
aaaagaaacgatgttgagaaggaagatggtcacactgaaaaacaatcttctgttggtggc
aatcgcattgggtctgaccgtgacactgattctcgtgataaatggaggccacgacatcga
ttggaagctcaagctgctggtgtggctacataccgtgctgcacctggatttgggctggag
aaaggacgtacagaaggctccaatgtgcgattttcaccaggaagaggaagggctaacatt
aatggaaacttacaaattgtaaggtctcctataggttcgagtcttggatctgcacttgtg
gataggaataaaaccatattggggaagtctagccttggtgctgattcgtattactacccg
aggggtaagctccttgacatatatcgcaagcaaaaggttgatccaaattttgatagcctg
ccttctgagatggagcatatatcgcccttcactcaacctggtgctgttgaaccattatca
tttgttgctcctggtgctgaggaagaggttgtcctcaaagaaatatggaaaggaaaaatt
actagcagtgaagttgcgggctattcctttagaggaagggatggagggtcaaatgatgat
atttcaggtcctgttcttgtaagtgaaggaaaacaacaaccttccattggcagtagtgca
aaggttatatcaggaagtgtctcggatgattctgatcaaatattaattagttcagcatca
actgctggtggtttattgagaaacattgttggggaagttgcaactgttcaagaaggcaag
cagaaacatatgcctgctattggtgttcatggcagagatgagagttctgtcagcatcatt
ggagatggaagcattccaggaaacaaagttgtggaatcagcaacttttgatctccatcag
ggacaatctttagcttttctggaacatgctaatcggaatggtgttgactcaattggtggt
tctgaaatcaatagcagtctacctgatgattctcgcactctctttgatttttcatctctg
cagcaaactccaaacgttaatcaacaggatttcaaaattaatgagaagacatatgtgcct
gaaagtgttattgctcttgaggagttgagtttgtgctatctggatcctcaaggggaaatt
caaggaccctttcttgggattgacattattttgtggttcgaacaaggatttttcggaatg
gacttgcctgttcgcttgtcagatgctcctgaaggatcaccatttcatgaacttggtgac
attatgcctcatttgaaagtcaagtcaggattaggctctggtagtaatagggttattcaa
tcagaaccttctgatgccattggaaggaacctaaaagtagatgtgcataattttgattat
gatgggtcttctgctagcgatgatcaaccttggtcttcttcccgacctgatactagctca
agtgttggtattcctgctcaaatacccaatcatagttatcactctgaggtcaagttctct
gatgatcagggcttcagtaatattgctgcacacgatgaggatatctctttgtcaaaattg
gccggaagcataaatgataaacctttgatgaggcccatggatgtcaatacattgcattct
catcctaccggcaaatctcttgccaatgaagttgcattgagtgattctcaccatgaagct
gataagttgcacccatttgggttgttgatgtctgaactcagagatggttctcatttaagg
cgtgcacaatcttccaatagttccttgagattgggtgatcagggtcattttctagatcca
ttaatggatagagatgcttcttttactgatcaacaaagctctattagtggtatggttaat
caaccttctttcagggagaaatggggtgataaatatggtacaattagacattttcaggaa
gatcagttcctttcccatattggacaaattcagaaagaaaggcttcagcagcagagtaat
atatctaatcatttccctggtcatcttaatgggtcagagttagataggtttccaggttat
gcactttcgcagaacatgaactccaacctacagcagatgatgcagaattctgggtcagat
tttgaacgtattctggaacatcagattcaacaataccagcttgagttacagcaacagcaa
gatatgcatcaccaacaattattacaccaacaaatgaaacttcagccccagcaacagtct
caagtccaacaattgcttcatgaacagtttatgcagcagccaatccctgatcccaatttt
gggcagtccaaacatgatatttccagggataacctgttagatcaggtacaaatgaggaga
tatattaatgacttgcatctgaattcacattctttaaggcaccttgatccgtcaatggaa
catattatccaagcaaatatgggtctcaatgctgcccaaggaagacaagctgatttgtca
gacctcttgttgcaagcaaggcatggtaatatattaccttctgaacagcttcattttcag
caagatcagttgcaagcacagcagctatctttggcttttagacagcagttaggcttagat
ggagaaaggcattttggtaggtcatggccaattaatgaaaccggacagttgattagaaat
cctggaacccatcaactaggtctttcagcaggatttaatgtttcagatatacacaaacag
cagcagaggcttgtgacacaagaggagcaattaaattacttggggaggaatcttccagag
cagaaccagagagggttctatgataatcctatgatgtttgagaggtctgcacctatttcc
caaggaagggaattacatgaccgtcgtcgctatttacatcgaggtgatcaaatggattct
ttatcctctcatcatctacaaccaactgatgatctttttggtcaccaccctgatgctttc
aagagttcactccatgtcaacaatggacatgtggaaaatagttggattgatccccgggta
caattacagcagcatcttgaagctgtgaggcagagaagagagttaggcgatgctgtttca
tcagcagatctgaacatgtctggatctgttgtttctcatgaagacagttctgcacgaggt
tttatggacctacttcataaaaaactgggtgtgcaatccgcacaaccatcagctgttgat
aaatggcatcctctttcatcaagaagtgacaaatcttggcatgttcccgaggctagttca
ataatgcatccttttgagcttcagcctgatcatcagcaagtccatctgaatgaccctttt
ttagaaagggcgcagagtactaattccaatgccttaatccatgatcatttgtccagcatg
catatctctgaccaatacaacagtctagggaacactgaaagaatgcctcttcggtctaga
tctggttcattacttgaagaacaatcactgttatctgcaaatatggaccctttacatccc
aattacagaattccttttcagattggtaaatcatctatggaaaaagacttgcttgagtta
gaggcaaataagggtcagagacatgaatatatgggcacaatgaataatttagttccgggg
atgtcggatatgtcagagcaagtggaaagcatcatgaattccatggaactacctgcaatt
gcccatagtagacatagctcactgagcagtgcaggtggtgatggctcatttggtcgagag
ataggtttgaataattcacgaggagatgaggtttcgggtgacaggatacctccttcaacc
aaaggttttgataacactttccttaagcgcccccatgtatctcgggttttatcttcacct
gatgtccagtcagaccagccatccgcacccagtgtcaatcaaaataatttaataaatctc
acagctagtgaagggagacgagaaccgtctgcaaattcgtcaatgagtagcatgacagat
gctcaggctgctggaaagaaggaggttcggtttagatcttcttcgttcagcgaaggtgct
gtgtcagagacatcatttatagacatgctgaaaaagcccgttcttcctgaggtagtggtg
gattcgcatgcagccagtggagttgggagtgaatcatctgatgcagcacaagcagctaga
ggcgggaaaaagaaagggaagaaaggaaaacagatagatccttctcttcttggtttcaag
gtctccagtaaccggatcatgatgggtgagattcaacgccctgaagactga
DBGET
integrated database retrieval system
