Vigna unguiculata (cowpea): 114184233
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Entry
114184233 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114184233
03041 Spliceosome [BR:
vun03041
]
114184233
03036 Chromosome and associated proteins [BR:
vun03036
]
114184233
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114184233
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114184233
mRNA cycle factors
Common to processing body (P body) and stress granule
114184233
Spliceosome [BR:
vun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114184233
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114184233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114184233
NCBI-ProteinID:
XP_027927317
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All DBs
Position
1:complement(41958812..41964919)
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AA seq
594 aa
AA seq
DB search
MPTSWADLAANSASENAGTSNSTAPTRPVYVPPHLRNRAASASTESTPAPPPPNANANNN
AGSRWGAPRNGWGSRSGGWDRREVNPFGDQEDAAEEGATAFGEEQENTGINFDAYEDIPV
ETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGS
GKTAAFCFPIISGIMRGQGQPPQRPPRGARTVYPLALVLSPTRELSVQILEEARKFSYQT
GVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIKYLALDEADRML
DMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTD
LIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCRNGFP
ATTIHGDRSQQERELALRSFKTGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH
RIGRTGRAGKKGLATAFFNDNNASLARPLADLMQEANQEVPDWLSRYAARSSIGGGRNRR
TGGNRFGGRDFRREGSFSRGGGSDYYSTGNNSGGYGNSGGYGGGYGPGVTSAWD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatcgtgggctgatttggctgcgaattccgcctctgaaaatgcgggaacatcc
aactccacagctccgacgcggcccgtttatgtgcctccgcatctgaggaaccgtgcagca
tcagcatcaacagaatccacccctgctccgccaccacccaatgcgaatgctaataataat
gccggatcacggtggggtgcgcccagaaacgggtgggggagcagaagcggtggttgggat
cggcgggaagtgaaccccttcggagatcaggaggatgcagctgaagagggagcaacagct
tttggcgaggagcaggaaaacacgggaattaattttgatgcttacgaggacattcccgtt
gagacgagcggtgaaaacgtgcccccacctgtgaatacttttgcggagattgacttgggc
gaggctcttaatcagaacattagacgctgcaaatatgttaaaccaacgccggtccagcgg
catgccatacctatatcccttggcggacgggatttgatggcttgtgcacagactggttcc
ggaaagactgcggcattctgtttccctatcatcagtggcattatgagaggtcaagggcag
cccccccagcggccccctcgcggtgcccgtacagtctatccacttgcccttgttctgtcg
ccgactagggagttatccgtgcaaatacttgaagaggctaggaagttttcatatcagaca
ggggtcagggtcgttgttgcctatggtggagctcctataaaccagcagctacgggaactt
gagagaggggtggatattcttgttgcaactccaggaagattggtagatttgctggagaga
gctagagtttcattgcagatgatcaaatatttggccttagatgaggcagataggatgctg
gacatgggttttgaaccacaaataaggaagattgtagaacaaatggacatgcctccacca
ggtgccagacagactatgttgttcagtgccacatttccaagagagatacagagactagcc
tctgatttcctttcaaattatatttttctggccgttggaagagtgggctcaagtaccgat
ttgattgtccaaagagttgagtacgttcaagagtctgacaagagaagtcacctcatggat
cttcttcatgcgcagagggcaaatggtgtacaaggaaagcaagccttgactttagttttt
gtggagacaaagaagggagctgatgctctcgagcattggttgtgtcgtaatggttttcca
gcaactactattcacggtgacaggtcacaacaggaaagagaattggcattaagatcattt
aaaactggcaacacccccatattggttgcaactgatgtggctgcacgcgggcttgacatt
cctcatgttgcccatgtggttaactttgaccttcctaatgatattgatgattatgtacac
cgtattggaagaacagggcgagcaggaaagaaaggccttgcaactgcgttctttaatgac
aacaatgcatcactagctaggcctttagcagatctgatgcaagaagcgaatcaagaagta
cctgattggctctcacggtatgctgctcgctcttctattggtggtgggcggaaccgtcga
acaggaggaaaccgatttggtggccgtgactttcgaagagaaggttcttttagtaggggt
ggtggttctgattactacagtacaggaaacaacagtggtggatatggcaattctggtggt
tatggtggaggatatggtcctggggtaactagtgcttgggactga
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