Vigna unguiculata (cowpea): 114185359
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Entry
114185359 CDS
T06017
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
vun
Vigna unguiculata (cowpea)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-GeneID:
114185359
NCBI-ProteinID:
XP_027928834
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Position
5:810304..822575
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AA seq
1402 aa
AA seq
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MDSETLDSTQLFLTALKTLQPELPPPASTSTSTSLPPLPSSLPHSKLIPHTRFLVDAFRH
AGPYSHSYFLSHFHSDHYTGLSASWSRGVIFCSATTASLLRNILHVPAALVVPLPLRQPL
RIDGAQVTLLDANHCPGAVQFLFAIPSADGTATLRYVHTGDFRFSSSMVSEPALASFVGA
DAVFLDTTYCNPKFVFPSQEESIDYVASVVERIERECGDSNDKVLFLVATYVIGKEKILL
ELARRFKRKIHVDARKMEVLRVLGYGESGEFTENGLESNIHVVGWNVLGETWPYFRPNFV
KMKEVMAERGGSYSRVVGFVPTGWTYEVKRSRFAVKSKDAFQIHLVPYSEHSNYDELREY
VKFLKPKRVVPTVGLDVEKSDSKHADKIRKHFAGLVDETANKHEFLRGFCGGLGEVGFKA
EKGVSDVLEPGQGMDKKVIPLEEIKSDKSIDPDVAVGLPSFVGDTCTEDPTLLSDEEKEK
IIGELSFCLPTWVTRDQMLDMISISGSNVVEAVSNFYERETEFHEQVISCQTPVSTSKCC
TLNDTDSLAKPSLNNANSTRKNIDIFSSQDSKSTILRHKVPSPISPAKRKRSSDSKPNKK
GKVKAKSEPSGSKQSTLTRFFRKVTPEIPGGTQSDNSEPKLEQSSEVEDLLPTDVGQMYK
DEIDQFLQIINGNESLKNHAMTIIKKTKGDVNKALDIYYCNSGNLTENELSVQKESKIDK
PLVKKHASEEIRIMPDISGQKVLKDNVDATQLSLPPEKYNPIEHACWRDGQPAPYLHIAR
TFNLLEGERGKIKATSLLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGSLV
TAAIEEACGTSRLKIREMYNKFGDLGDVAQECRQTQRFLAPPTPLLIKDVFSALQKISVQ
TGSGSISRKKGIIVHLMHSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVAMNSSPT
FHQGGTAENLKEKLQVLSMEVVEAYNILPNLDLIVPSLMNKGIDFLVSSLSMVPGIPIKP
MLAKITNGIPQALKLFENKAFTCEYKYDGQRAQIHKLVDGSICVFSRNGDETTSRFPDLI
DIIKESSKPVASTFVMDAEVVGIDRKNGCRIMSFQELSSRGRGGKDALVTAESIKVDICI
FVFDIMFANGEQLLGFPLRHRRKYLKDLFYYEKPGYFEYAKEITIEADDACLACEATLTK
VNAFLEEAIQSSCEGIMVKTLDVEAGYFPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWH
GNGRKAGWYSPFLVACFNPETEEYQSVCRVMSGFSDSFYIEMKEFFSGDRVLSKKPPYYQ
TGEAPDIWFCPEVVWEIKGADFTVSPVHHAAIGLVHPSRGISIRFPRFICCVSDRNPEEC
STASDIVEMFHSQTRKMDVTAK
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaaccctagactccacccagctgttcctcacagccctcaaaaccctccaa
cccgagcttcctcctccagcctccacctccacctccacctccctccccccactcccctcc
tccctccctcactccaaacttatccctcacacacgcttcctcgtcgacgccttccgccac
gccggcccctactcccactcctacttcctctcccacttccactccgaccactacaccggc
ctctccgcctcctggtcccgcggcgtcatcttctgctccgccaccaccgcctctctcctc
cgcaacatcctccacgtccccgccgccctcgtcgtccctctccccctccgccaaccgctt
cgcattgatggcgcccaagtcaccctcctcgacgccaaccactgccccggcgccgtacag
tttctcttcgccatccccagcgccgatggcaccgccaccctaaggtacgttcacaccggc
gacttccgcttttctagctctatggtttcggagcccgccctcgcctccttcgtcggtgcc
gatgcggtttttctcgacaccacatattgtaaccctaagttcgtttttccctcgcaagag
gaatccattgattacgttgccagtgttgtggagaggattgagcgtgagtgtggtgatagt
aatgataaagttctgtttcttgttgctacttatgttattgggaaggagaagattttgctt
gagcttgcacgtaggtttaagaggaagatacatgttgatgctaggaagatggaggttttg
agggttcttgggtatggggagagcggtgagtttactgagaatgggttggagagtaatatc
catgttgttggatggaatgtgttgggggagacttggccatactttaggcctaattttgtt
aagatgaaggaggttatggctgagagagggggttcctactccagggttgtgggctttgtt
cctaccggctggacctatgaggtgaagcgcagtaggtttgcagtcaagtccaaggatgca
tttcagattcatcttgtgccctatagtgagcactcgaactatgacgagctcagggagtat
gtgaagtttttgaagccaaagcgtgttgttccgactgtgggtttggatgttgagaagagt
gacagtaaacatgctgacaaaattaggaagcattttgctgggttggtcgatgagactgct
aacaagcatgagtttttaaggggcttttgtggcggccttggtgaagtgggtttcaaggct
gagaagggtgttagtgatgttctggaacctggtcaaggcatggacaaaaaagtcattcca
ttggaggagataaaaagtgataagagtattgatccagatgtggctgtgggtttgccttct
tttgtgggagatacttgtactgaagatcctactttgctgagcgacgaagaaaaagagaaa
ataattggagaacttagcttttgtttgcccacatgggtcacccgagaccagatgctggat
atgatcagcatatctgggagcaatgtcgttgaagctgtttctaatttctatgaacgtgaa
actgaatttcatgagcaagtgatttcctgtcaaactcctgtttcaacatccaagtgctgc
acattaaatgacactgattcacttgcaaaacctagccttaataatgcaaacagcactagg
aaaaatattgacattttttctagtcaagactctaaatcaactatcctgaggcataaagta
cccagtcccatttctcctgccaaaaggaagagaagtagtgacagtaagccaaacaaaaaa
ggcaaagtcaaagcaaaatctgagccaagtggttcaaagcagtccacgcttacaagattc
ttcaggaaagtaacacctgagattcctggtggtactcaatctgataattctgaaccaaag
cttgagcaaagctctgaagttgaagacttgttaccaactgatgttggacaaatgtacaag
gatgaaattgatcaatttttgcagataataaatgggaatgagtcattaaagaaccatgcc
atgactataattaagaagacaaaaggagatgtcaataaagcacttgatatatattactgt
aattctggaaatcttaccgaaaatgaattatcagttcaaaaggagagcaaaattgataaa
ccattagtaaagaaacatgcatcagaggaaataagaattatgcctgatatttctgggcag
aaagtgttaaaagataatgtagatgctactcaactatctctaccaccagagaaatacaac
cctatagaacatgcatgttggagagatggacagccagcaccatatttacatattgcacga
accttcaacctgctagagggtgagagaggaaagattaaagctacttcactgttatgcaat
atgtttagaagtttgttggctttatctccagcagatgtgcttcccgctgtgtatctatgc
acaaacaaaattgctgcagaccatgaaaataaggaactaaatattggtggaagtttagtc
actgcagcaattgaagaggcatgtggaacaagtcgtttgaaaatacgggagatgtataac
aaatttggtgatctcggtgatgttgctcaagaatgtcgtcaaacacagagatttcttgca
ccaccaacaccacttctaattaaggatgttttctctgcactacaaaagataagtgtacaa
acaggcagtggaagtatatctcgcaagaaaggaatcattgttcatctcatgcactcctgc
cgagagaaggagatgaagtttcttgttcgaaccttggtcaggaacttaaggataggggcc
atgcttagaactgttttgcctgcattggctcatgctgttgctatgaattctagccctact
tttcaccaaggaggaactgcagaaaatttgaaggagaaacttcaggttctttctatggaa
gttgttgaagcatataacatactgccaaatctggatctaatagttccatctctcatgaac
aaaggcattgattttttggtttcaagtttatcgatggttccaggcatccctattaagcct
atgctagcaaagatcaccaatggtattcctcaagcactgaagctatttgaaaataaagca
tttacatgtgaatataagtatgatggtcagcgggctcaaattcacaaattagttgatgga
tcaatttgtgttttttcaagaaatggggatgaaacaacttcaagatttcctgatctgatt
gacataatcaaggaatccagcaagcctgttgcatcaactttcgtaatggatgcggaagtt
gttggtattgacaggaaaaatggatgcaggattatgtctttccaggagctatcatcacgt
gggagaggtggaaaagatgcattagttactgcagagagcatcaaggtggatatatgcatc
tttgtttttgatatcatgttcgcaaatggagagcagttattgggttttcctctgcgccat
agacgaaagtatctgaaggatttattctattatgagaaacctgggtattttgaatatgca
aaggaaattactattgaagcagatgatgcttgcttagcttgtgaagccacattaaccaag
gtaaatgctttcctggaagaggcaatccagtcttcttgcgaaggaattatggtgaaaaca
ttggatgttgaggctggctattttccatcaaagcgttcagacaaatggttaaaagtcaag
cgagattatgtggaaggattaaatgatactcttgatttagtaccgattggtgcttggcac
ggaaatggaaggaaagctggatggtatagtccatttcttgtggcgtgtttcaatcctgaa
acagaggagtatcaaagcgtatgtcgtgtgatgtctggtttttcagattcattttatata
gagatgaaagaatttttctctggggacagagtcttgtccaaaaaaccgccatattatcaa
acaggagaggcaccagacatttggttttgtccagaagtcgtttgggaaataaaaggagca
gactttacagtatccccagttcatcatgctgcaattggtttagttcatccatctcggggc
atttcaatcagatttccaagatttatttgctgtgtctcagacagaaacccagaagaatgt
agcacagcttccgatatagttgaaatgtttcattctcagactcggaagatggatgtcacg
gctaaatag
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