Vigna unguiculata (cowpea): 114188418
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Entry
114188418 CDS
T06017
Name
(RefSeq) uncharacterized protein LOC114188418
Organism
vun
Vigna unguiculata (cowpea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
RVT_3
rve
Retrotrans_gag
Integrase_H2C2
Motif
Other DBs
NCBI-GeneID:
114188418
NCBI-ProteinID:
XP_027932806
LinkDB
All DBs
Position
6:complement(11843470..11848797)
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AA seq
1747 aa
AA seq
DB search
MRNRNSNMDGGRLADDQADTREMIRAMQQRMDEMQRNYEAQMLSRVQQHRDAERVESRLP
PTGHEQSQPARIERTQVSRGNPSHTAAESSGANNGGRPSRQPIPASGSSPFTAYILETPL
PEKWKVPTFDKYDGTTDPDNHMRVFMHQMMFHAVSDPIWCRVFSTSLTGEALEWFSELPA
GSIDSFATLKARFSTQFAPLKPAILTVDNLVNIRQEDGESLRSYLDRYNRMSVKIRGLSD
EIARHHFSYGLQPGVFADKISRKKPKTMEEMRERAAKFIQMEDMQEFKVKKREKEDVALP
KPIVPRPNKPAARPTERKPPKFTTYTPLAVPRARILQEAFSADSLPAVRKKPPPPDADGS
KHCQYHRTIGHTTEECHTLRDKIEELIRQGHLKKYIRQDRPPWSPVRNRSPMRRVPPARS
EKKREPEREKRRRGPSQSHQSPRRSRSRSHDRPLRGYINTISGGFAGGGSSSAARKRHVR
ALKSVHLVERKIRSMPPITFTDDDFKAPDPDHDDPMVISIEVAEYGIGKVLVDQGSSVNI
LYWKTFQRMNLSEDLIVPYNEQIVGFSGERVDTRGYVDLRARIGSRKDGREVRVRFLLVE
ANTSYNVLLGRPCLNAFGAIVSTLHLAMKFPSDKGTICTVHADQQVARQCYAVGLRITPY
SRPRKQHRSEVAMTDLDHRTNTEDRLQPEGETKEILIGSQPGQVTKIGGALSVEDEDLLK
TVILENKDLFAWSSADMPGVHPDVMSHKLAVFREARPVAQKKRKMGEERRRAVEDEVRKL
EGAGFIKEIKYTTWLANVVMVKKASGKWRMCTDFTDLNKACPKDAYPLPSIDRLVDGASG
HNLLSFLDAYSGYNQIPMYGPDRSKTAFITDRANFCYEVMPFGLKNAGATYQRLMDRVFR
EQIGRSMEVYVDDMVVKSQTTDDHARDLREVFHQVRKYNMRLNPEKCVFGVPAGKFLGFM
LTARGIEANPDKCAAIVEMRSPKNLKEVQRLMGRLTSLACFLPRLTEKVRPILKIMKKQS
AEKWDDQCEAAFQKIREMISSPPIMCRPVEGLPLQLYLSVSDDSISAALVQETSEQRPVY
FISRVLQSAETRYQQIEKIALALLTAARRLRQYFQSHLVIVRTDHPIAKILRKLDLAGRM
IAWSVELSEFGLKYEPRGSIKGQHLADFATELQGSIPPSERIWTLFVDGSSDKRNAGAGI
VIEGPNGFTVEHSLQFKFKASNNQAEYEALIAGLRLAKDLGAAKLKCNTDSKLVVGQVLG
EYQIKDDLLLQYYHKAVEAMKEFEEVTIHHIPRAENTRADRLSKLAEGKEKGQLKTIIRQ
TLMRPSAGECAAVDRSADWIGEVRELLKRCEAGEEIRPTERRRALRFVIIGEDLYKRGFT
APLLKCLSADKAEYVMNEVHNGICGMHTGRRTMKARILRAGYFWPTMEQDCESMIRKCEG
CQAHGNDVKKAPTELHSLTAPWPFTQWGMDIVGPFPVGRAQKKFILVAVDYFTKWVEAEA
LANIIARQVHSFVWRNIICRFGLPHTIITDNGRQFIDKKLRDFYKQVGIRHVTSSVEHPQ
TNGQAEAMNKVIVAELKKRLGEAKGAWVDELPQVLWAYRCTPHGTTGESPFNLTYGTDAM
LPVEVGEPTLRREMQDLEVNCGRLREELDWTTERRERATVRAEACKRMVARRYNAKVKPR
SFVKGDLVWRKTNDARKKSTQGKLAPNWEGPFRVTESLQNGAYWLEHLSGKEIPNTWNAS
HLKMYYS
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccgaaacagcaacatggacggaggaagattggcagatgatcaggcggacact
agagagatgatacgggcgatgcagcagagaatggatgagatgcagaggaactatgaagcg
cagatgctgagtcgggtacaacagcatcgggatgctgagcgagtagagagtcgtcttcca
cccacgggacatgagcaatcacaaccagcccggattgaaaggacacaggtttcgagggga
aatccgtcacacacggcggcggagagctcaggagcaaacaacgggggccgcccgtcgcgc
caaccgatccccgcgtcggggtcctcccccttcactgcgtatattttggagacaccgcta
ccggagaagtggaaagtgccgacgtttgacaagtacgacggcacgactgacccagacaat
cacatgcgtgtcttcatgcatcagatgatgtttcacgccgtcagcgaccccatctggtgt
cgggtcttctcaacttcgttgactggggaggcgttggagtggttctccgagctaccggcc
ggtagtattgactcgtttgctactttgaaggcaaggttcagcacacagttcgcgcccctg
aaaccggccattctgacggtcgataatctagtgaatatccgacaagaggatggggaatcg
ctgagaagttaccttgatcggtataatcggatgtcggtcaagataagaggtctcagcgac
gagatcgcgcgacatcacttttcttatggactccagccgggagtttttgcggacaagata
agccgcaagaaaccgaagacgatggaagagatgagggaacgcgcggccaaattcatacag
atggaagatatgcaggagtttaaggtaaagaagagggagaaggaggatgtcgcactcccg
aagccgatcgtgcctagaccgaacaaacccgcagcccgacccaccgaaaggaagccaccg
aagttcacaacttacactcctctggctgttccccgggccaggatcctgcaagaggctttc
agcgctgattcgctccccgcggttaggaagaagccaccgccacccgatgccgacggcagc
aaacattgccagtaccatcggacaatcggacatactactgaagagtgccacacgctccgt
gacaagatagaagagctcattcggcagggacacttgaagaaatacattcgacaagatcgt
cccccatggagtccggtgaggaaccgaagtccgatgagaagagtccccccagcccgatct
gagaagaaaagagaacccgagcgcgagaaacgaaggagaggaccatcccagtcacatcaa
agtccaagaaggagtcgtagtcgtagtcatgatagacccctgaggggttacataaacacc
atctccggagggttcgccggaggagggtcgagctccgcagctcgaaaaaggcacgttcgg
gcgttgaagtcggttcatctggtcgagaggaagatccgctcgatgccccccatcacattc
acggacgacgacttcaaggcacccgatcccgatcatgatgacccgatggttatctcgata
gaggtggccgagtatgggatcgggaaggtgttggtcgatcagggaagctctgtcaacatc
ctatactggaagactttccagaggatgaacctctccgaggacctgattgtaccatacaat
gagcagatagtaggtttctcgggcgagcgggtcgacacgaggggatatgtggaccttcgt
gcgaggatcgggtcaaggaaggacggccgagaggtaagggttagattccttttggttgaa
gctaacacctcgtacaatgtattgctagggagaccctgtttgaacgccttcggagcgatc
gtgtctaccttgcacctagccatgaagttcccgtcggacaaagggacgatttgcacggta
cacgcagaccaacaagtcgcccggcaatgctatgccgtgggattgaggattactccttat
agccgcccgcgaaaacaacatcgttcggaagtagcgatgacagacctagaccaccgaacg
aacacggaggatcggttgcaaccagaaggagagaccaaggaaatcctgatcgggagccaa
ccaggacaggtcaccaagattgggggagccctgagcgttgaagacgaagacctcctcaag
acggtgatcttagaaaacaaagatctctttgcatggtcgagcgcagacatgcctggcgtc
cacccagatgtgatgtcccataagttggccgtcttccgagaagctcgtccagtcgcgcag
aagaagagaaaaatgggagaggagcggaggagagcggttgaggacgaagtcaggaagctt
gaaggagcgggtttcatcaaggagatcaaatacactacgtggttggcaaacgtcgtcatg
gtgaagaaggcgagcgggaagtggaggatgtgcacagatttcacagacctaaacaaagcc
tgtccgaaggatgcatatccgctgcctagcatcgacaggctggtagatggagcctcagga
cacaacctcttgagtttcttagacgcctactcagggtacaaccagatccccatgtatggc
ccagacaggtctaaaacggcgttcatcaccgaccgggccaacttctgttatgaggtcatg
ccattcggcctaaaaaacgcaggagcaacgtatcagaggctgatggaccgggtcttcagg
gagcagatcggtcggtctatggaggtatatgttgacgacatggtcgtgaagtcccaaaca
accgacgatcatgcacgcgatctcagagaggtcttccaccaggtgcgcaagtacaatatg
cgtctcaaccctgagaagtgtgtcttcggggtgccagcagggaaattcctgggtttcatg
ctgaccgcccgaggcatagaggcaaatccagacaagtgcgctgctattgtcgagatgaga
agtcctaaaaacttgaaggaggttcagcgattgatggggcggctgacttctctggcatgt
ttcctacccaggttgacggagaaagttaggccgatactgaaaatcatgaagaagcaaagt
gcagaaaaatgggacgatcaatgcgaggcggcgtttcagaagataagggagatgatcagt
agtcctcccataatgtgccgaccggtggaaggattgcctctacaactgtacctgtcagta
tcggacgactcaatcagtgcagccttagtacaggaaacctcggagcagcggcccgtttac
ttcatcagccgagtattgcagagtgcagaaacgaggtaccaacagatagagaagatagcc
ttggcgctgttgacggccgcgcgccgattgcgccaatacttccagagtcacctagtgatc
gtccgtaccgatcatcccattgccaagatactccggaagctcgacttagctggtaggatg
atcgcctggtcggtcgagttatccgagttcggtcttaagtacgaacctagaggatccatc
aaagggcaacatttggccgactttgcaactgagctccaaggatcgatccccccatcggaa
cgcatttggactctcttcgtggatgggtcatcggataagcgtaatgctggagcggggatc
gtcatcgaagggccgaacggcttcacggttgaacactccttgcagttcaagtttaaagcc
tcgaacaatcaagcagagtatgaagcgctgatcgccggactaaggttagcaaaagactta
ggagcggcgaagttaaaatgcaacacagattcgaaacttgtggtaggacaggtgctagga
gaatatcaaattaaggatgatttgctgctccagtactatcacaaagccgttgaagctatg
aaagaattcgaagaggtgaccatccatcacatcccccgagcagaaaacaccagagccgac
agactatctaagctagcggaaggaaaagagaagggccagttaaagacaattatcaggcaa
accttgatgagaccttcagcgggagaatgtgctgcagtggatcgatcggccgactggatc
ggggaggtgcgagaacttttaaagagatgcgaggctggcgaagaaatcagaccgacggag
agaagacgagcactccgattcgtgatcattggagaagatctatataagagaggcttcacg
gcgcccctcctcaagtgcttatctgcagacaaagcggagtatgtcatgaacgaggtccat
aacggcatttgtggaatgcacaccggtcggaggacgatgaaagcgagaatactccgagcg
ggatatttttggccgaccatggaacaagactgtgaatccatgatacgcaagtgtgaagga
tgccaagcccatggaaatgatgtaaagaaggctccgaccgagttacacagcttgacagct
ccttggccgttcactcaatggggcatggacatcgtcggacctttcccggttggccgagcg
cagaagaaattcatacttgtagcagtagactacttcaccaagtgggtcgaagcggaggct
ttggctaatatcatcgctcggcaggtccactccttcgtctggcgcaatatcatatgtcgc
tttggcctcccccacacgatcatcaccgacaacggtcgtcagttcatcgacaaaaaactg
agggacttctataagcaggtagggataagacacgtcaccagctcggtcgagcatccccaa
accaatggccaggctgaggccatgaacaaggttatagtggctgagttgaagaaaaggctg
ggagaagccaaaggagcatgggtcgacgagctaccacaagtcctttgggcctatcggtgc
acgcctcatgggacgacgggagaatctcctttcaacctcacatatggtacagacgccatg
ctgccagtcgaggtaggggagccgactcttcggcgggaaatgcaagatctcgaggtgaat
tgcggacgactgcgcgaggagttagactggacgaccgagcgaagagagcgagcaactgta
cgagctgaagcatgcaagagaatggtggctagaaggtataacgcgaaggtcaaaccaaga
agcttcgtcaaaggcgatttagtatggaggaaaaccaatgacgcccgaaagaagtcaaca
cagggaaagctagcgccaaactgggagggcccgttccgcgtgaccgagagcctgcagaac
ggagcctattggctagagcacttgagcggtaaagaaatacccaacacgtggaacgcttca
cacctcaaaatgtattacagttaa
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integrated database retrieval system
