Vespa velutina (Asian hornet): 124956470
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Entry
124956470 CDS
T09814
Name
(RefSeq) collagen alpha-1(V) chain-like isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124956470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vve00536
]
124956470
Glycosaminoglycan binding proteins [BR:
vve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124956470
BRITE hierarchy
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
124956470
NCBI-ProteinID:
XP_047368270
EnsemblRapid:
ENSVVEG00005013463
LinkDB
All DBs
Position
22:1996865..2005149
Genome browser
AA seq
1750 aa
AA seq
DB search
MQGDHAKQQWRILRFYRTIIHPYVVTLFLILSTLPSTRANLNTEDIERGVVDLMESTGMY
QESLGLIITENRCKKNDTIAFDIAESTLLTINTNAIFPTGLINNFSIIVVARTKINFPMA
TLFSIYDDGGQEQLILSLGKDITFFYDTSDDINDVEKEPISFGEDISDGKWHRLSISVKG
NTITLLLDCKKEITKELKRNLSESINVDGIIIIGQQLMEENIFLGGLELLKIAPTPDAAY
ELCTIFAPDCEQEEIYKFDNNNSIIDEPISSKPFNISFDKRSGYEDFEGIKENEKENLNE
ENIEAYPLRYVPTNFTFILRPTMRTIINEPITIYNRNEQSTTQSYESETITEENPYPTIE
TFNLPSYSNPNEDYYYNNKYYNLRGSPGPRGFPGPPGMVGSQGKKGEPGKEGLAGLNGAP
GPPGHVFMIPSLNQQGNEKGPDSQMETLRQILSQYMLAMRGSEGPMGLTGIPGPDGPPGP
QGQKGEPGDIGEPGPRGDRGIPGNTGREGRRGRPGRDGERGPTGPPGIKGEQGPPGLPGL
PGDKGERGSPGAIGEPGLPGHEGMQGDDGPPGLPGLPGELGPRGFIGPRGFPGMPGNPGI
PGSEGSPGAKGNTGPSGPPGLPGPSGPSGPVGPPGPQGPLGPTGLVGPQGKTGIPGLPGA
DGHPGHPGNPGIPGLKGEQGILGPQGSIGFPGVRGPKGDDGKRGLPGDRGEKGDKGIEGE
KGDAGLKGERGPLGPQGIPGIEGIEGPRGFEGNRGEQGPIGPPGEKGKIGISGLIGYPGN
PGEKGDKGQIGREGSNGEKGERGNNGLPGDRGEIGPRGFRGVRGRRGSEGLPGPKGDTGQ
PGPPGPAGESGPPGIEGPRGFIGSPGQLGLDGKDGIPGLPGERGPIGESGPPGPIGSPGV
IGPQGSPGESGQPGEPGIPGSPGIPGDVGTPGEQGKEGPPGPQGLSGKDGPPGPVGLPGF
PGERGLVGLPGTPGLKGEMGPIGLPGPSGDKGAQGEPGKDGAIGPEGRQGPKGPFGPPGI
KGDRGETGLPGPTGRDGLPGQRGLSGPPGPVGVPGEDGDKGDIGPPGEKGFKGSQGSTGL
AGAPGLQGPRGEPGLVGATGEKGPPGEIGRQGMKGEDGPIGVPGPAGPVGPQGLPGPSGS
KGEIGDMGSIGPAGPAGSPGEQGQKGPRGADGPPGLQGLEGRQGEKGDSGLPGLPGVEGA
DGNPGERGPPGQKGEEGKPGPSGPPGNRGPVGPEGPKGNVGSPGFPGPPGEPGLIGPKGE
PGKDGEDGGSGKPGPPGDIGSPGKEGLAGTQGRPGPEGPAGIQGNTGLPGDKGEVGPPGL
PGPQGRPGGEGQPGPPGLSGVRGLSGSAGESGPPGIPGAVGLPGIAGPDGPKGPKGDRGR
RGLKGHRGDIGPIGMKGDQGEKGEIGIRGLTGPEGPKGNTGPLGQTGLKGNDGPPGLPGL
EGPPGPKGYTGNDGSKGDIGPPGPPGLPGPPAEQPMIPPELLFTQSHFYKRKREILDDTQ
EDNEKENDLNKEEINNDEDNELGPKFLDVYTSIYSIRQELDRIRKPTGTRENPVRTCKDL
FYGHPHFSDGWYWIDPNLGMPDDAVYVYCNMTNMGETCVFPDIHSSQMPNIPWRKEDEKG
NWYSKLRGGFRITYETIGVIQLNFLRLLSEEGYQNFTYTCMNSVGWYNAPNNSYDLSIRL
LGENEDEFSYDNAKPIIIADGCKSRKSKSETVFLVQTDKLQKLPLIDFHPLDYGLPHQAF
GFNVGPLCFK
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagatcacgcgaagcaacaatggagaattctacgattttatcgtaccatcatc
cacccttacgttgttacactttttctcattttatcgacgttaccatcgacaagggcgaat
ttaaatacagaggatatagaaagaggtgtcgtcgatctcatggaaagtactgggatgtat
caagaatctcttggattgataattacagaaaatcgttgtaaaaaaaacgatacgatcgca
ttcgatatcgccgaatcgactttattaaccataaatacaaatgctatctttccaactgga
ttgattaataatttttcgatcatcgtcgttgcaagaactaaaatcaattttcccatggcc
acattattttccatttacgacgatggcggccaagaacaattgattttatcattgggcaaa
gatataacattcttttacgatacttccgacgatattaatgacgtcgagaaagaaccgatt
tctttcggtgaagatatttccgatgggaaatggcatcgtttaagtataagtgttaaagga
aatacaattactcttctcttagattgcaagaaagaaattacgaaggaattaaaaagaaat
ctttctgaaagtataaacgtcgatggaattatcattataggtcaacaacttatggaagaa
aatatatttttgggaggacttgaacttttgaagatagcaccaacgccggatgcagcttat
gaactttgtacaatatttgcacctgattgcgaacaagaagagatatataaattcgataat
aataactcgatcatcgatgaacctatatcatctaagccgtttaacatatcctttgataag
cgttctggttatgaagatttcgagggaattaaagaaaatgagaaagagaatctcaatgaa
gaaaatatagaagcatatcccttgcgatatgttcctacaaattttacatttatattaaga
ccaacaatgagaacaataatcaacgaacctattactatatataacagaaatgagcaatct
acaacacagagttacgagagcgaaactattacagaagaaaatccttatcctacaattgaa
actttcaacttaccatcatattcaaatccaaatgaggattattattataataataaatat
tataaccttcgtggatcacctgggcctcgaggctttccgggtccaccaggaatggttgga
tcacaaggaaagaaaggagaaccaggaaaagaaggattagcaggattaaatggtgctcct
ggtccacctggccacgtatttatgataccttcgttaaatcaacaaggaaatgaaaagggt
cccgattctcaaatggaaactttgagacaaatattgtcgcaatatatgttagcaatgaga
ggtagcgagggaccaatgggtttgactggtattcctggtccggatggacctcctggacct
caaggacaaaaaggagaaccgggtgatataggtgaacctggacctagaggagacagagga
attcctgggaatactggcagagaaggtagaaggggacgacctggaagagatggagaacgt
ggtcctacgggaccacccggtataaagggagaacaaggtcctcctggactaccaggttta
ccaggagataaaggtgaaaggggatctccaggagctattggggaaccaggattaccaggt
catgaaggtatgcagggtgatgatggacctcctggtctaccaggattgcctggtgaattg
ggaccgagaggttttattggaccacgtggtttcccaggaatgccaggaaatcctggtata
cctggaagcgaaggttctcctggtgcaaaaggcaatactggcccatcaggcccacctgga
ttacctggtccatctggaccatcgggaccagttggtccacctggtcctcaaggaccttta
ggaccaaccggattagtcggaccacaaggaaaaactggcataccaggtcttcctggagca
gatggtcatcctggacatccaggtaatcctggaattcctggattgaaaggtgaacaaggc
atattaggtccacaaggatccataggatttcccggtgtacgtggtccaaaaggagatgat
gggaaacggggattacctggtgatcgaggtgaaaaaggcgacaagggaattgaaggagaa
aaaggtgatgcaggtttgaaaggagaacgaggaccattagggccacagggtattcctggg
atcgaaggtatagaaggaccaagaggattcgaaggaaatcgtggagaacagggtccgatt
ggaccacctggagaaaaagggaaaatcggtatatctggtttaataggatatccgggaaat
ccgggtgagaagggtgataaaggtcaaattggaagagaaggatcaaatggggagaagggg
gaaaggggaaacaatggtttgccaggtgatcgtggagagataggtcccagaggttttaga
ggtgttcgtggtagaagaggttccgaaggattaccaggtccgaagggtgatactggtcaa
ccaggacctccgggaccggcaggagaatctggaccaccaggaatagagggtccacgtgga
tttataggatcaccaggacaacttggacttgatggaaaagatggtattcctggtcttcca
ggggaacgtggaccaattggtgaatctggtcctcctggtcctattggatctcctggtgta
atcggtccacaaggttcaccaggagaatctggtcagccaggtgaacctggcattccaggt
agtccgggtataccaggagatgtaggtacaccaggcgaacaaggtaaagaaggtccgcct
ggtcctcaaggactatctggaaaagacgggccgcccggtcctgtaggattacctggattt
ccgggtgaaagaggattggtcggtttaccgggcacacctggattgaaaggagaaatggga
cctattggtttgccaggaccatccggagacaaaggagctcaaggagaacctggaaaggat
ggagctataggtcctgagggtagacaaggcccgaaaggaccgtttggtcctcctggtata
aaaggcgacaggggtgaaactggtttaccagggccgaccggtagagatggtttaccagga
caacgaggattatcaggccctcctggtccagttggtgttccaggagaagatggtgacaaa
ggagatattggaccacccggtgaaaaaggctttaaaggttctcaaggttcaactggttta
gcaggagcaccaggacttcaaggaccacgaggagagccaggtcttgtgggagcaacaggt
gaaaagggaccacctggtgaaattggtagacaaggaatgaaaggtgaagatggtccaatt
ggtgtacctggtcctgctggacctgttggaccacaaggtcttcccggtccatcaggatca
aaaggagagattggagacatgggttcaatcggacctgctggtccagctggtagtccagga
gagcaaggtcaaaagggacccagaggtgcggacggtccgccaggtttacaaggtcttgaa
ggtcgtcaaggagagaaaggagatagcggtttgccgggtcttccaggagtagaaggtgcc
gatggaaatccgggagaacgaggtcctcctggacaaaaaggagaagaaggtaaaccggga
ccgtccggtcctcctggaaatcgtggtcccgttggaccagaaggaccaaaaggaaatgtg
ggctctccgggttttcctggacctccaggagaaccaggtttaattggccctaaaggggaa
ccaggtaaagatggcgaagatgggggatctggaaaacccggacctccaggcgacattgga
tcacctgggaaagaaggtttggccggtacgcaaggaagaccgggtccagagggcccagcg
ggaatacaaggcaatacaggtttaccaggagataagggcgaagttggaccaccgggtcta
ccaggtccacaaggacgaccaggaggagaaggtcagcctggtcctccgggattatcaggt
gtaagaggattatcaggttcagcaggagaaagtggaccaccaggaattccaggagctgtt
ggtttacccggaatagctggacctgatggaccaaaaggtccaaaaggtgatagaggtcga
agaggtttgaaaggacatcgaggtgatattggtccaattggaatgaagggtgatcagggt
gaaaaaggcgaaataggaatacgaggtcttacaggaccagaaggtcctaaaggaaataca
gggccactcggtcaaactggtttgaaaggtaacgatggaccaccaggtttgcctggttta
gaaggtccaccaggacccaaaggttacactgggaacgatggatcgaaaggtgatataggt
ccaccaggtcctccaggtctccctggacctccagcggagcaaccaatgattccaccagaa
ttattatttactcaatcgcacttttataaaaggaaacgagagattttggacgacacacaa
gaagataatgaaaaggagaatgatctgaataaagaggaaataaataacgacgaggataac
gagttgggacctaaatttttagatgtatatacttctatctacagcataagacaagagctc
gatagaatacgtaaaccaactggaaccagagaaaatcctgttagaacatgtaaagattta
ttttatggtcatccacatttcagcgatggttggtactggatcgatccaaatttaggtatg
cccgacgatgccgtttatgtttattgcaatatgacaaatatgggagagacttgcgttttt
cctgacattcacagtagtcaaatgccaaatataccttggagaaaggaagacgagaaaggc
aattggtattccaaattgcgtggtggatttcgcataacttatgagactatcggtgtaata
caattaaatttcttgcgcttgctcagtgaagagggttatcaaaattttacatatacttgt
atgaatagcgtaggatggtacaatgcacctaacaatagttatgatttgtcgatacgtttg
cttggagaaaacgaagatgaattttcttatgataatgcaaaacctattatcatagcggat
ggttgtaaatcgcgaaagagtaaaagtgaaacggtgtttctcgttcaaacggataaactt
caaaaattgccacttatcgattttcatcctttggactatggcttacctcatcaggctttt
ggttttaacgttggtccattatgttttaaatag
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integrated database retrieval system
