KEGG   Vitis vinifera (wine grape): 100242430
Entry
100242430         CDS       T01084                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase LIN-1 isoform X1
Organism
vvi  Vitis vinifera (wine grape)
SSDB
Motif
Pfam: U-box WD40 zf-Nse ANAPC4_WD40 zf-RING_UBOX TPR_12 zf-C3HC4_4 NBCH_WD40
Other DBs
NCBI-GeneID: 100242430
NCBI-ProteinID: XP_010656297
LinkDB
Position
11:join(2919705..2920505,2921702..2921935,2922027..2922112,2922191..2923360,2923478..2923622,2923793..2924050,2924252..2924558,2925137..2925261,2925344..2925460,2926340..2926471,2926551..2926673,2926887..2926997,2927107..2927253,2927835..2928080,2928189..2928206)
AA seq 1339 aa
MASATSSAEILRHTTAFTSETLSQSKLRLRLLSALRRKLPTSDQNVLRQLNLAAETLENA
ISTSSSFNRSSSLRVAEKLLHSHPDTLFSSFLLSLLYALLNRHTEAAHSLLNIFSSDPSL
ARSEIAPVVFEEFFLIHLLPVLQSFKDQRSRILSSLSSKNLGYDSDKRSRFEESVVVSGT
RLLSKMSGGQTSELKELERDYEEVLDENCRLLVGYFREVLGNENGSRLIRPPSLIFEKTR
KSDEFKFNEDEQNKVEEIGLGNGRYNNPTWTEGERSVEFYSSGSSSKSKSPPFYPQRVSL
KILRNQKSSRTLSAISANLNSGSELESSSEDNLSNSSSESEGETQKKNRKMALFEPRRSQ
IQKQKQPIYAESSSSPERVMAADSDDPPGGGKCTPPKDFICPITSHIFDDPVTLETGQTY
ERKAIQEWIDRGNSTCPITRQKLHSTQLPKTNYVLKRLIASWQEQNPGFISIHSDNPDPE
TDPIFNSTLPVLPSTSPNSVIISQATMDGTICELRLAITKLCMSEILRESEKAVLRIERF
WQEMNMGLEIQTMLSKPAVINGFVEILFNSVDPRVLRATVFLLCELGSRDKTVIQTLTRV
DSDVECIVALFKNGLLEAVVLIHLLRPSTISLIEMDMVESLLVVIKKKQDGFLEMCLKPK
TASILLLGQILGSSEGNIVTSIAKTVVSAKAIKSIVESLEAEWAEERIAAVGILLRCMQE
DGKCRHTIADKAELAPVLESFMGASDGERFEIINFFSELVKLNRRTFNEQVLHIIKDEGA
FSTMHTLLIYLQTALQDQCPVVAGLLLQLDLLVEPRKMSIYREEAMDTLISCLRNSDFPA
AQIAAAETIVSLQGRFSSSGKSLTRASLLKRAGLDKSYRTLMQVDQLSNSSGESEENLEE
EQAADEWERKMAFVLVSHEFGLLFEALAEGLRSRNQELFSSCFLSATWLIHMLTVLPDTG
IRGAARVCLLKHFISMFKSAKGTEEKALSMLALSSFIHDPEGLNDLTSHMKDILKGLRQL
KKSCILAVDMLKVFSEGNNSSIDLWNHKELVQVDCSANGEVLSIVCFRDKIFSGHSDGTI
KVWTGRGSILHLIHETREHTKAVTSLAILESGERLYSGSLDRTARIWSIGSEAIYCVQIH
DMKDQVNNLVVANSIACFIPQGAGVKVHSWNGKSKLLNPNKNVKCLTLVHGKLYCGCHDN
SIQEIDLATGTLSSIQSGTRKLLGKSNPVHALQVHDGMIYSSSFSLDGAAVKIWSATNYS
MVGSLASTMEVRTLAVSSELIYLGSKSGTVEIWCRKKLIRVETLQTGTNGKVQCMAVDGD
EEVLVVGTSDGRIQAWELS
NT seq 4020 nt   +upstreamnt  +downstreamnt
atggccagtgccacctcttccgccgaaatcctccgtcacactaccgctttcacatctgaa
actctctctcagtccaaactccgcctccgtctcttatctgccctccgacggaaactcccg
acttccgaccaaaatgtcttaagacaactcaacctcgcagccgaaaccctagaaaacgcc
atttccacttccagctccttcaatcgatcgtcctctctccgcgtcgccgagaagctcctc
cactctcaccctgataccctcttctcctcgttccttctatctcttctctacgctcttctc
aaccgccatactgaagccgctcactctctcctcaatatattctcctccgatccttcattg
gctcgatcagaaattgcaccggtggtgtttgaggagttttttctcatccacctccttcca
gttctacaatctttcaaagatcagagatccagaattttgtcatctctatcgtcgaaaaat
ttaggttatgatagtgataaaaggtcgagatttgaggaatcggtagtagtttccggcact
aggctgttgtcaaaaatgagcggcggtcaaacttcggagcttaaggaattggagcgggac
tatgaggaggttctcgatgagaattgcaggcttttagttgggtacttcagagaggttctg
ggcaatgaaaatggaagcagattgattcgtccaccatcactgatatttgaaaaaaccaga
aaaagtgatgaattcaaattcaatgaagatgaacagaacaaagtggaagaaatcggattg
gggaacggccggtataataatccaacatggactgaaggagaaaggtcagttgaattctac
agcagcggtagcagcagtaaatccaagtctccacccttttatcctcaaagggtctctcta
aagatcctcagaaaccagaaatcttcaaggacattgagtgcaatatcagcaaatctaaat
tctggttctgagctggagtcttcttcagaggacaatttgagcaattcttcttcagaatct
gaaggtgaaacacagaaaaagaacagaaaaatggcattgtttgagcctagacggagccaa
atccaaaaacagaaacagcccatatatgcagaatccagcagttctccagaacgtgtcatg
gcagcagattctgatgatccgcctggtggtggaaagtgtacgcctccgaaggactttatc
tgtcccataaccagccacatattcgatgatccggtgactcttgagacaggtcagacatat
gagaggaaagcaattcaagaatggatagataggggaaactccacatgcccaatcacacgc
cagaagctgcatagtacccaacttcccaaaacaaactatgtactcaaacggctcattgca
agttggcaagaacaaaatcctggttttatctcaattcactctgataatccagacccagag
actgacccaatcttcaactctacactgcctgtgctaccttcaacttctccgaacagtgtt
ataataagccaagccaccatggatgggacgatttgtgagctgcgacttgctattaccaag
ctttgtatgtctgaaattctgagagagtcagaaaaggcagttctccgaattgagcggttc
tggcaggaaatgaacatgggattggagattcaaactatgctctcaaaacctgctgttatc
aatgggttcgttgagatcctttttaattctgttgatccccgggtgctgagggcaaccgtt
tttctcctctgtgagcttggatcaagagacaaaactgtgatccaaacacttacccgagtt
gactctgatgtggaatgcattgttgctctattcaagaatggtttgctggaggctgttgtg
ttgatacatctgttaagaccttccaccataagcttaatagagatggatatggtggaatcc
ctcctggtggttattaagaagaaacaagatggttttcttgagatgtgtttgaagccaaaa
acggcttctattcttctactgggacagattcttggaagcagtgaagggaacattgtcact
tcaattgccaagactgtagtatctgcaaaagcgattaaaagtattgttgagagcttggaa
gctgagtgggcagaggagagaattgcggcagttgggatcttgttgagatgcatgcaggaa
gatggaaagtgcaggcataccatagctgacaaagctgaattggctcctgttttggagagc
ttcatgggcgcgagtgatggagaacggtttgagataattaacttcttctctgagttagtt
aaactaaataggaggacattcaacgaacaggttctccacattataaaggatgaaggtgct
tttagtacaatgcacaccctcctcatttatctacagacagccctccaggaccaatgtcct
gttgtggctggtctacttcttcagcttgatctcctggtggagccaagaaagatgagtata
taccgggaagaggcaatggatactcttatttcatgcctgagaaactcagacttccctgct
gcccaaatagcagctgctgagacaattgtgtcgctgcaagggaggttctcatcttctgga
aagtccctcacccgggcttctctccttaaacgtgctggacttgacaaaagttatagaact
ctaatgcaagtggaccaactcagcaacagttctggagagtctgaagaaaatttggaagaa
gagcaggcagctgacgaatgggagagaaaaatggcatttgttctggtcagccatgagttt
ggtctgttgtttgaagctttggcagagggcctcaggagcagaaaccaagagttattttca
tcatgctttctatcagctacttggcttatacatatgctcactgttcttccagacacagga
ataagaggagcagcccgagtctgcttgctcaagcacttcatatccatgttcaaatctgca
aagggcacagaagagaaagccctttccatgcttgctctgagcagcttcatccatgatcct
gagggactcaatgatctgacttctcacatgaaggatatattgaaaggcctgagacagctt
aagaaatcatgtatattggcagttgatatgctgaaagttttctcagaaggaaacaactct
agcattgacttgtggaatcataaagaattagttcaagtagattgcagtgcaaatggagaa
gtgctatcaatagtctgcttcagggataagatattttctggccattcagatggaacgata
aaggtatggactggcagaggtagcattcttcatctcatccatgaaactcgagaacatacc
aaggcagttactagcttggcaattttagaatcaggggagagactgtacagcggctctctt
gatagaactgcaaggatatggtcgattggaagtgaagcaatttactgtgtacaaattcat
gatatgaaagatcaggttaacaatctagttgttgccaatagcattgcatgcttcattcca
cagggagctggcgtcaaggttcactcatggaatggaaaatccaagttattaaatccgaac
aaaaacgttaagtgcttgactcttgtacatgggaaattatactgtgggtgccatgataac
agtattcaggaaattgatttggccacaggaacactgagtagcatccaaagtggcacgcga
aaattgctggggaaatcaaatcctgttcatgcactgcaggttcatgatggaatgatatat
tcaagtagcttttccttggatggagcagctgttaagatttggagtgccacaaactacagt
atggtgggatcacttgcatccacaatggaagttcggactttggcagtgagctcagagcta
atttatttggggagcaagtcaggaactgtggaaatttggtgtaggaagaagctcattaga
gtagaaacactacaaactggtaccaatggcaaggtacaatgcatggctgtagatggtgat
gaagaagttttggtagtaggaacttctgatggccgcatacaggcatgggaactgagttaa

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