Vitis vinifera (wine grape): 100246290
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Entry
100246290 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100246290
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
vvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100246290
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100246290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100246290
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100246290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100246290
NCBI-ProteinID:
XP_010644568
LinkDB
All DBs
Position
19:complement(8510346..8512544)
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AA seq
732 aa
AA seq
DB search
MSVEEGDGGGFGDGGDPGDQFHRNEAISAVADEGFIGEEDDDYEDLYNDVNVGEGFLQSL
RKNEDLGFRNEVEENKIDPAVPSVPPTLPPAAGMSIPGVGGDVGGGAERKFEKDVAVGVS
EGGARVSVRLEGYQSVGYRGNEMGVKGPGGASQGGATVGGGGMRVQLGQSSIKTSDFEEQ
TVNNTVGVQGIVQQQPHGGGVGSVGNEGLARQGGGNVNGNTGGYVVGNNGIGGSVGGGGG
GGGGGGGGGGGGGGGGTILFVGDLHWWTTDAELEAELCKYGVVKEVKFFDEKASGKSKGY
CQVEFYDPAAATACKEGMNGHLFNGRPCVVAFASPYSVKRMGEAQVNRNQQMAQTNISQG
RRGQGDGGGKPGGSNVQQGGNFQGGDNNRGYGRGNWGRGNAQGMGGRGPVGPMRNRSGGM
GGRGIMGNGGNGFGQGIAATPPLLHPQTMMGQGFDPSFGAPMARMGGYGGFPAGPTPPFS
GILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPATSVEGPNMGMWSDPNMAGWA
GDEHGGRAGESSYGEEAGSDHQYGEVSHDRGGWQNTMKEKDRGSERDWSGSSDRRYRDDR
EQGFDRDMPREKDLVHENDWPERKHREDRDIGRDRDRERDRERERSRDRERDRDRERDRD
RDRDRDRERYREDRDRYADHHRYRDRESEHDDEWDRGRSSRTHSKSRLSQEEEQRSRSRD
ADYGKRRRLTSE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaggaaggcgacggaggtgggttcggcgacgggggagatccgggggatcag
ttccaccggaacgaggcgatctccgccgttgccgacgagggttttatcggcgaggaagac
gatgactacgaggatctttataatgatgtgaatgtaggcgagggttttcttcaatctctc
cgtaaaaatgaagatttaggctttagaaacgaggtggaggagaacaagattgatcccgcg
gttccatcagtgcccccgacgctgcccccagcggcgggtatgtcaatacctggagtgggt
ggtgatgttggcggaggtgcagagcggaagtttgagaaggatgtggcggtaggcgtttct
gagggtggggctagggtttctgtgagattggagggttatcagagtgtggggtacagaggg
aatgagatgggcgtgaaaggaccgggtggtgcgtcgcaagggggagctacagttggtgga
ggtgggatgagggttcaattagggcagtcgtccataaaaactagtgattttgaggagcag
actgtgaacaatacggtaggggttcaagggatcgtgcagcaacaaccacatggtggtggt
gtcgggagtgttggaaacgagggtttagcaaggcaaggaggcggaaatgtgaatggaaat
acaggtgggtatgtggttggcaacaatggcattggtggcagtgtaggcggtggtggtggt
ggtggaggtggtggtggaggtggtggtggtggtggtggtggtggtgggacaatacttttt
gttggagatttacattggtggacaacggatgctgagcttgaggcagagctatgtaagtat
ggggtggtgaaggaggtcaagttctttgatgagaaggcgagtgggaagtctaaaggatat
tgtcaggttgagttctatgatcctgctgcagccacagcttgtaaagagggaatgaatggg
catctctttaatgggcgaccttgtgttgttgcatttgcatcaccttatagtgttaagaga
atgggagaggcccaggtgaatagaaatcagcagatggcccagactaacatttctcaaggg
aggagggggcagggtgacggtgggggaaaacctggtggcagcaatgttcaacaaggcggg
aattttcaaggtggggataataataggggttatggtagaggtaattgggggagaggcaat
gcccaggggatgggaggtagagggccagttggtccaatgagaaataggtctgggggaatg
ggtgggaggggtataatggggaatggtggaaatggatttgggcagggtattgctgcaacg
cctcctttgttgcatcctcaaacaatgatggggcagggttttgatccatcctttggggcc
cctatggcaagaatgggtggctatggaggttttcctgctggaccaacaccacccttttca
ggaatattgtcttcattcccacctgttggaggagttggtttgcctggtgtagctcctcat
gtgaacccagcattctttggacgagggatgcccatgaatggaatggggatgatgccggcg
acaagtgttgagggacctaatatggggatgtggtcggatccaaatatggctggatgggct
ggtgatgagcatggtgggagagctggggagtctagttatggggaggaagcgggatctgat
catcagtatggtgaggtaagtcatgataggggaggctggcaaaacacaatgaaggaaaag
gacagaggatctgaacgggactggtcaggatcctctgacagaagatatcgagatgataga
gaacaagggtttgatagagacatgcctagggaaaaagatctggttcatgaaaatgattgg
cctgaaagaaagcatcgtgaagatagagatattggtcgtgatcgtgatagggagcgtgat
cgagaacgggaacgttctcgagatcgcgaacgggaccgtgatagggagcgtgatcgggat
agggatcgtgaccgtgatcgggaacgatacagggaagacagagacagatatgctgatcat
cataggtatagggaccgtgaatcagaacatgatgatgaatgggataggggacgatcatca
cgaacacacagcaaatcacgattatcacaagaggaagaacaacgatcaagatcaagggat
gccgattatgggaagaggcgacggctaacctctgagtaa
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