Vitis vinifera (wine grape): 100246408
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Entry
100246408 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100246408
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
RVT_2
WAK_assoc
GUB_WAK_bind
Retrotran_gag_2
Retrotrans_gag
Kinase-like
YukC
Retrotran_gag_3
gag_pre-integrs
DUF1776
Motif
Other DBs
NCBI-GeneID:
100246408
NCBI-ProteinID:
XP_059598703
LinkDB
All DBs
Position
14:join(20534454..20535204,20540972..20540995,20541109..20542210,20543194..20543366,20543897..20545260,20545795..20545888,20546024..20548094,20548271..20548932,20549709..20549744,20549941..20551109)
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AA seq
2481 aa
AA seq
DB search
MHLHLFPVFLILLFMFMVPVPRVVCEENQQFVNCGAQYECGNMNISYPFWGGSRPPYCGH
PGFELTCNGEAPVFTMKEASYRILDINNSFHTLTVARADYWDSYCPPTYVNTTLNESIFS
YNATYTDVTLYYDCPQLTIAPSNQFNCTNIIGYYTTLDFNLGVSIGSCDVYVTVPIFKSA
ATAIVSGGGTLTLLTEALKGGFGLEWNASNSLCTECVESGGRCGYTSNQFICYCRNGYSP
STCQNKTSPSGIVTKKAIGISAGVAGIIVVLAVICCLRRKCLLGKTLVFWKKETGDNQNV
EAFVRNYGSLAPKRYKYSVVKKMTNSFTCKLGQGGFGCVYQGKLPDGRQVAVKLLSESKG
NGEEFINEVASFSRTSHVNIVTLVGFCFEGTRRALIYEFMPNGSLDKLIYQKGSPNANLK
LEWKTMYQIAVGIARGLEYLYRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCQRK
ESMVSMAHARGTAGYIAPEVFCRNFGGVSHKSDVYSYGMLVFEMIGGRKNIDAQVSHTSQ
IYFPTWIYKQLQPGEDLILHSITNEEEEETARKMVLVSLWCIQLNPSDRPSIDKVVEMLE
GSLQSLEIPPNPFMFPTQNATQDPSTQFSKLQPLTLFCVVEMDFHVAYCLSKTPVGLSSL
ASFTRNTGMEMIWPFMTSDTQPDKHFWINLLDPPMADSSFSFNTMIHMITIKLSSTNYLL
WRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQYVAWQLQDQRLLSLLFSSL
TEEAMVEVLGLTTARDVWLALENSFSHISKTRELRIKDDLQLIKRGTRSVTEYSRSFKAL
CDQLTAMGRSVDDTDKVHWYLRGLGADFANFSTAQMSLTPLPVFKDLVPKAESFEIFQKS
LGSSFPVSSAAFTATNGSFPSSRGGSSSKSRRSRGGYHGGHGHGRGKRGSYIPRCQICKT
EGHTADRCRSRYNRAEPTTQLAEAFTTACSLSNGSESDWFTDTRASAHMTPDPSQLDKVE
PYHGKDCVIVGNGASLPITHTGTLSSSSNFQLLDVLVVPRLTKNLLSISKLTSDFPLSVT
FSHDNFVVQNRITRMAVAKGKRAGGLYVLERGHSAFASVLRNKNLHASFELWHARLGHYW
VDAFSTATYIINRLPLPVLGGLSPFEVLFGFRCFDTTTSRTYITRHARFDEHFFPFSNTS
SATSIADIGLSNFFEPCALEPSPSTSSPTTTRVPPSPPCHFCADDFAVEPLQVSSSAPES
TSSSAAVSPVPASATTLVPFAAPMDPIHTTTSAAPASHPMITRAKSGIFKPRHPAHLSFV
QSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKIKALQTNHTWDLVPRPSNTNIVGSKW
VFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLR
QLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLL
KLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILTGNNPALINRFISQLHSEFAVKDLGP
LSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSSEGTPFADPT
LYRSLVGALQYLTITRPNLAHSINSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKFTS
CSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALAL
TAAKVLWLTHLLRDLRVTLTHRPLLLCDNKSAIFLSSNPVSHKRAKHVDLDYHFLRELIV
AGTLRIQHIPSHLQLADVFTKSVSRDLYVFFRSKLRVCVNPTLSLRGAVEDSSKSVLDLR
VVVLQTFLTYPFWGSPRPPYCGLPEFKIECQDEVPVIQIMSESFRVLKINHDNHILRLTR
LDLYNGTCPSRFLNTTMNYLFSYSPHFGNLTRFFGCSSASPALASNKFSCRRNNTSSIET
GYFTIGSIPTNGNLGNCNVSITVPVLPSAVSAIINNSASLEQVLNDGFEVLWIIDDTACS
ECMGSGGRCGYNTSHFQPICFCSDQPYLLRCPALPGTTVQDHKPDVGILILIAALLFGVC
SIMVVAVFIWSLRRKSSSNTWRVFWKKTRNSQNVEAFLEKYASLAPKRYSYSDVKKMTDS
FRNKLGQGGYGIVYKGNLPDGHLVVVKILSEPKGNGEEFINEVASISRTSHVNIVTLLGF
CFEGHKRALIYEFMPSGSLEKYIYDENQPRKIPPLGWEKIYRIAIGIAHGLEYLHSGCNT
RILHLDIKPQNILLDQDFTPKICDFGLAKLCPTKESSMSLLSARGTVGYVAPEVFSRNFG
VVSHKSDVYSFGMMILEMVAGRKIIDTGASRSSEIYFPHWIYKHLELEDDHLKLQHIFSE
GGEPVARKMIFVGLWCIQTNPANRPSIHKAVDMLEGSHEDLQIPPKPFPSSPVRTPPGTP
TTSSTNLFQSSDEYTSTITLA
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccatctttttccagttttccttatcctcctgttcatgttcatggtccctgtt
ccgagggttgtgtgcgaggaaaatcaacaattcgtcaactgcggcgcacagtatgagtgc
gggaatatgaatattagttatcctttctggggagggagccgccctccttactgtggccat
ccagggttcgagctgacttgtaatggtgaagccccggtgtttacaatgaaggaggcgagt
taccgaatcctggatatcaataactcattccatactctcaccgttgctagggcggattac
tgggatagttactgccctcctacatatgttaacactactctgaatgaatccatttttagt
tataatgccacctatacggacgtgaccctctactatgattgtccccaacttactatcgcg
ccttccaaccagttcaattgcaccaatatcattggttactatacaacactggattttaac
cttggcgtaagcatagggagttgcgatgtgtatgtgacagttccgattttcaagtcagca
gctaccgctatagtgagcggtggaggtacactgactcttcttacagaagctcttaagggt
ggtttcgggttggagtggaatgccagtaatagtttgtgtacagaatgtgttgaatccggt
gggcggtgcggctatacctccaaccaattcatatgctattgtcggaatgggtattctccc
tccacttgccaaaacaaaacaagcccatcaggaatcgtgacaaaaaaggccataggtatc
tccgcaggcgtggctgggatcatagtagttttggcggtgatttgttgccttagaagaaaa
tgcttattaggtaagacactggtcttctggaaaaaggaaacaggggataatcaaaatgtg
gaagcatttgtaaggaactatggatccttagctccaaagagatacaagtattcagttgtt
aagaaaatgaccaactcattcacatgtaaattaggtcaagggggatttggttgtgtgtac
caaggaaagctccctgatggtcgtcaggtggcagtgaaactcttgagtgagtcaaagggt
aatggggaagagtttattaatgaagttgctagcttcagtagaacctctcatgttaatata
gtcacccttgtgggtttctgtttcgagggtactagaagagctctgatttatgaattcatg
cccaacggatctctcgataagctcatctaccagaaaggatctcccaatgcaaacttgaag
ctggaatggaaaaccatgtaccaaattgcagttggcattgctcgaggactggaatactta
tacagaggttgcaacacaaggattttgcattttgacataaaacctcacaacattctttta
gatgaagacttctgcccgaaaatttctgattttggccttgctaagctgtgccagaggaaa
gaaagcatggtgtcaatggcgcatgcaagaggcacagctggatacatagctcctgaagta
ttctgtagaaattttggaggagtctctcataaatctgatgtctacagctatggaatgttg
gtttttgaaatgattggaggaagaaagaatattgatgcgcaagtgtctcacaccagccaa
atatattttccaacttggatttataagcagctccaaccaggcgaggatcttatactccat
agtatcaccaatgaagaggaggaagaaacggcaaggaagatggttttagtaagtttgtgg
tgcattcagctcaatccatcagaccgaccatcaattgataaggtagtagagatgttggaa
ggaagccttcaatccttagagattccaccaaatcctttcatgtttcctactcaaaatgca
acacaagatccttccacgcaattctcaaaacttcaaccattgactcttttctgcgtggtt
gagatggattttcatgtggcctactgtctatcaaagaccccagttggattatctagcttg
gcttcatttacacgaaatacaggaatggagatgatttggccattcatgaccagtgatacc
caaccagacaagcatttttggattaacctcctcgatcctcccatggcagattcttccttc
tccttcaacaccatgatccacatgatcactattaaactctcctccacaaattatcttctc
tggcgaaatcaacttctccctcttcttcaatgtcagaatctccttagccatgtcgatggt
tctgttgcgccgcctccaatcactatagccgttgattcttcttcttctcaaccgaatcct
caatatgtggcatggcaacttcaagaccaacgtcttctcagtctcctcttctcctccttg
actgaagaagccatggtcgaagttcttggtctcaccaccgctcgtgatgtctggcttgcc
ttggaaaattccttcagccatatttccaagactcgtgagcttcgcatcaaagatgatttg
cagctcatcaaacgtggcacccgaagtgtcactgaatattctcgttcattcaaggcttta
tgtgatcaactcactgcaatgggtcgctcggttgatgacaccgacaaagtccactggtat
ctcagaggattgggcgctgattttgctaatttttccactgcccaaatgtctctcacccca
ttaccggttttcaaagacttggttcctaaagctgaaagctttgagattttccagaagtca
ctcgggtcctccttccctgtttcttctgctgcttttactgccactaatggatcttttcct
tcatctcggggtggtagttcctccaagtcccgtcgttctcgcggtggctaccatggaggc
catggacatggacgtggtaaacgtggttcctatattcctcggtgtcaaatctgcaagact
gaaggtcacactgctgatcgatgcaggagccgttacaatcgtgctgaacctacaacacaa
cttgctgaagcctttaccacagcctgttctctctctaatggctcggaatctgattggttc
accgataccagagcatccgctcacatgacccctgatccttctcagttggacaaggttgag
ccttatcatggtaaggactgcgtaatagtaggaaatggtgcttctcttcctattacacac
actggcacgctctcttcctcttccaattttcaacttttagatgttcttgttgttccccgt
cttaccaaaaacttgttgtccataagcaaactgacgtctgattttcctctctctgtcaca
ttttctcatgataattttgttgtccagaatcgaataacaagaatggcagtggcaaaaggt
aaacgcgcaggtggtttgtatgtgctggaacgtggtcactctgcatttgcttctgtcctt
agaaataagaatttacatgcgtcctttgaattatggcatgctcgtcttggtcattattgg
gttgacgctttcagcacagcgacctacattatcaaccggctgcctctgcctgttcttggt
ggtctttcaccttttgaagttttatttggttttcgttgttttgacaccacaacctctcgc
acatatattacacgacatgctcgctttgatgaacattttttccctttttcaaatacttcc
agtgccacttctattgctgacatcggtctctcaaatttttttgaaccctgcgcccttgaa
ccatctcctagcacatcatctcctactactacgcgggtccctccttctcctccttgccat
ttttgtgcggatgattttgctgttgagcccttgcaggtttcctcttctgctccagagtcc
acatcttcttcagctgcggtctcgcccgtacctgcctctgcgacgaccttggttcctttt
gctgctcccatggacccgattcataccactacttcagcggctcctgcctctcatcccatg
attacacgtgccaaatccggaattttcaagccacggcaccccgctcatctcagttttgtg
cagtcttctccattgatccatgccctacttgccacttctgagcctaagggatttaaatca
gctgccaaaaacccagcttggcttgctgccatggatgacaaaatcaaggcgcttcaaaca
aatcacacttgggatcttgttcctcggccctccaatactaatattgtcggttccaaatgg
gtttttcgaactaaatttctttcctatggatccattgagcgcttcaaagcacgcctcgtt
gcaaagggctacactcaacttcccggtcttgattacaaggacaccttcagccctgtcgtt
aaagcctccacagttcgtgttgtcctctctctcgctgtgtctcacaaatggcccctacgt
caacttgatgtcaaaaatgcctttctcaatggcattcttcatgaaactgtttatatggag
cagccactgggctatgttgatcctcgccatccccttcatgtttgcaaattaaagaaggct
ctctacggcttgaaacaagcacctcgtgcttggtttcaacgttttagttcatttcttcta
aaacttggttttttttgcagccgcgcagacacttctttatttgtgttcactaagaaggat
gatcttatttatctccttctttacgtcgacgacatcatcctcactggaaataaccctgct
ctcatcaatcggtttatctcccagctgcactctgaatttgctgtcaaggacttaggcccg
ttgagttattttcttggactcgaggtatcttacattccagacggttttttcctcagccaa
gttaaatatgctaccgatatcttggctcgtgctcaactgctggacagcaaaccagttcct
actcccatgattgtctctcaacgactctcctctgaaggtactccatttgcggatcccacc
ctctaccgttccttagtaggtgccttgcagtatttaacgatcacgcgtcctaatcttgcc
cactcaatcaactctgtaagtcagtttctccatgcgcctactgaagttcactttcaggca
gtcaagcgcatccttcgctatgttcaaggaacacttcattttggtctcaagttcacttca
tgctcttcaatgggcttagttgcatactcagatgcggattgggctggctgcccggacact
agacgctccacctctggctactcaatttttcttggcaataatcttgtctcttggagtgcc
aagaaacagccaacagtttctcgttcaagctgcgaatccgagtaccgcgctctcgccctt
actgctgctaaagttttatggctcactcatctcctacgtgatcttcgggttactttaact
caccgacctctccttctttgtgacaacaagagtgcaattttcttgagctccaatcccgtg
tcccataagcgcgccaagcacgttgaccttgattatcatttcctccgtgagctcattgtt
gctggcactcttcgcattcaacatatcccgtctcacttacaattggcggacgtcttcacc
aagagtgtctcacgggatctttatgtcttctttcgctccaagctccgagtttgtgttaat
cccactcttagcttgcggggggctgtagaggattccagtaaatcagttcttgatttacgt
gtggtggttttacaaacattcttaacctaccctttctgggggagtccccggccaccatac
tgtggccttccagagttcaagatcgagtgccaagacgaagtcccagtgatacagattatg
tctgaaagcttccgggtgttgaaaatcaatcatgacaatcatattctgaggcttactagg
ctagatttatataacggtacttgtccctcaagattcttgaacaccaccatgaattacctg
tttagttattctccccatttcgggaacctcacccgcttctttggttgctcatctgcaagt
ccagccttagcctcaaataaatttagctgtcgcagaaataatacatccagtattgaaact
ggctatttcacgattggctccattccaactaatggaaaccttggcaattgtaatgttagt
atcactgttcccgtgcttccatcagcagtgtcggctatcataaacaattcggcatctctg
gaacaagttttgaatgatggattcgaagtgctatggattattgacgacacagcttgttca
gaatgtatgggatctggtgggcggtgcggatacaatactagtcatttccaacccatctgt
ttttgctctgatcaaccttatctattgcggtgtccagccctaccgggcacaactgtacaa
gaccacaagcctgatgtgggaatcttgattcttatagctgcattgttgtttggggtttgc
agtattatggtggtagcagtttttatctggagcttaagaagaaaatcttcatcaaatact
tggagagtcttttggaagaaaacaaggaattctcaaaatgtagaggcttttctagaaaaa
tatgcatccttggctcctaaaagatatagttattcagatgtgaagaaaatgactgactca
ttcagaaataaattaggtcaaggaggctatggcattgtgtacaaaggaaacctacctgat
ggtcatctagtggtagtgaagatcttgagtgagcccaaaggcaatggagaagagtttatt
aatgaggttgccagcattagcaggacttcacatgtaaatattgtaacccttctaggcttc
tgctttgagggacacaaaagagctctcatctatgagttcatgcccagtggatcactcgag
aagtacatatatgatgagaatcaaccaaggaaaatcccccccttaggatgggaaaaaatc
tatcgaattgcaattggcattgctcatggtttagagtacctacacagtggctgtaatacc
cgaatactccatctggatatcaaaccacaaaacatccttctagaccaagatttcacccca
aagatatgtgactttggtctggcaaaactgtgccccaccaaagagagctccatgtcattg
ttgagtgcaagaggaacagtggggtatgttgcaccagaagtgttctcaagaaactttgga
gtagtctcccacaagtctgatgtttatagttttggaatgatgattctagaaatggttgca
ggaaggaagatcattgacactggagccagccgcagcagtgaaatatactttccacactgg
atctataagcatctggagctcgaagatgatcatctaaagctgcaacatatcttcagtgaa
ggaggggaaccagttgcaagaaagatgatttttgtggggttgtggtgcatacagaccaat
ccagcaaatcgaccttcaatacataaagcagtagatatgttagaaggtagtcatgaagat
cttcaaatcccacccaagccttttccttcttctcctgtaagaacaccaccaggtactcca
accacatcctctaccaatcttttccaaagtagtgatgaatatacctctactatcacattg
gcataa
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integrated database retrieval system
